Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00457 ATGGCTAACTCCCTAAACAACATCCTTCCCACTAAAATCACCCTACCCTTATTTGTAGCTTTGTTTCTCCTTTATCTATCGTTCCCTCTAGTGGTTTACTCATCATACGATATTTTAGCCCTGAATTGTGGCCATTCCATTGATACTACCTTTGAAAACCGAACCTGGGTTGGTGACATCGAAAATACCAAACTGTTTTCTATCACTGATTCTGTCAAAGCCAAACCAACTCCTAACTCTGATTCTGTTACCCAAATTCCATTTACCTCAGCGCGTATTTCTTTTTCAAATTTCACATTCTCATTCCCTTCGATCACTAATGGCCCGGTCTTTCTTCGCCTCCATTTTTACCCGACATCTTATCAAAACTTTGAAACCTCACATGCTTCCTTCACCGTCGAAGTAGGAAATCAGTTTACCCTTCTCAAAGACTTTAACCCCTCACTTTGGCTTCAAAACGATAACAAGACAATCGTCAAAGAATACTGCATCCAAGTCAAACCTAATGAGAGTCTTAACTTAACTTTTATTCCCGAAATCACAAACCAATTCAATGCTTTTGCTTTCATCAACGGAATCGAAATTGTGTCTATGCCTTCTTTTCTCTATTACACTAATCTCAGTGACACAAATTATCATATAAATTCTCTTGGCTTTGGCAACAACAACAGCGAAAGCCAAATTCGTAAAGACAAAGCTTTGGAAACCGTTTATAGAGTCAGTGTTGGTGGTAGTCAAGTTCCATCAAATGAAGATACAGGTATGTTTCGTTATTGGGAGGATGATTATCCTCGTTACTCGAAGAAACAATATCCACCGAGTATATCATCTGATTACTTACATGGTCTCAACTATGTAAAGAATACCATTCCAAATTATACTGCACCAGAAGCTGTTTACTTAACTGCAAGAACTTATGGAATGAATGAAACACACAATTATAATGTAACTTGGAACTTTGAAGTTGATTCTGCTTTTACTTATATGGTAAGGTTACATTTTTGTGAGTTTGATTCGCATATCAAGAACATCGGTGATAGAGTTTTTCAGATTTTCATAGCTAACACTTTGGCGGAGGAAAAGGCTGATGTGATAAGGTGGAGTGGTGGTAACAAGATTCCAGTTCATAAGGATTATGCTGTGACTATGGACACTCAACAAGGAAGCTCTCAAATTGAAAGAGTTAATCTTACAATCAAGCTACAACGATTACCAAAAGATATGTACACGATTTACCGTGATGTCAAGCTAAATGGAATCGAGATTTTGAAAATAAGTGACAACAATAAAAATCTTGCAGGATCAATATCAAAATCAGTTGATCTATCTAACAAATTTTCAACTGAATCGCCAAAGAAATTTAAGATCACAACAACTATCGGTGATGCGATTGCACTTTCAAGCATCGTGCTAATAATTGTTGGGGGAGTTACAATTTTTTGGCTAAGAGTAATTGTTGTGGGAATCGCAATTTTTTGGCTAAGAGGAAGATTTCAAAACTTCATTGAAGGTATCGTGCCCAAGACAAAGAATCAAGGGTCATCATCTTTGCCGCCCCATTTTTGTCGCTACTTTACATTGGAGGAGATCAAAGCGGCTACAAACAACTTCGATGATGTTTCCATCATTGGCGTTGGAGGGTTTGGCAATGTGTACAAAGGTTTTATTGATCGATCCACACCTGTTGCGATAAAACGCCTTAAACAGGGATCTCAACAAGGCGCCAACGAGTTCATGAACGAGATTGAATTGCTCTCCCAACTTCGCCATATTCACTTGGTATCCCTTGTCGGTTATTGTAATGATGACACGGAGATGATTCTAGTTTATGAGTTCATGCAACACGGTACTCTCTCCGAGTATCTCTATGGTTCCAATAACAAGAAATTACCGTGGAAACTAAGACTTGAGATTCTATTGGGAGCAGCAAGAGGGCTCCGTTATCTTCATGCTGAGGTGAAACAAAAGATAATACACCGTGATGTGAAGAGCACCAACATATTGTTGGATGAGAAATGGGTGGCTAAGGTTTCTGACTTCGGATTGTCCAAGGTGGGACCCATGGGGATATCGACTATCCATGTTAGCACAATGGTGAAGGGTAGTGTTGGGTATTTGGATCCTGAATATTATATGCTTGAAAGGTTGACTCTAAAATCAGATGTGTACTCATTCGGTGTGGTGCTTCTTGAGGTGTTGTGTGCTAGACCACCTTTGGTTCGCGATATGGACAAAAAGACAGCTAGTTTAGCTCTTTGGTTTCAAAGATGTTATGATGAAGGTGTGGCAATAGAACAAATAGTGGATCCGTTCCTAAGAGATTCTATCCCAAGTGGGTGTTTGAAATGTTATTGTGACTTGGCGTTGAGTTGTTTGCATGATGATGGGACTCAACGACCCTCAATGAGTCAAGTGGTTAGGGAATTAGAGTTAGCGTTGCAGTTGGTAATGGGGGAAGAAAGTAGTCAATTTGATAAGACCCAAACTGATGGAACACATATGAAAGAATCACAAGTCTTACAATCCATTAGTGACAAAGAAAGTTGCATGCATTTCACAAGATCTCGCACCTACAAGGAGGGCACAATAACTGCGAGGCCAAGTACTCAGGAACATTTTCTCTCTAATATTGAGAATTCAAGATTACGATCATATTCATGTTAA 2664 0.3911 MANSLNNILPTKITLPLFVALFLLYLSFPLVVYSSYDILALNCGHSIDTTFENRTWVGDIENTKLFSITDSVKAKPTPNSDSVTQIPFTSARISFSNFTFSFPSITNGPVFLRLHFYPTSYQNFETSHASFTVEVGNQFTLLKDFNPSLWLQNDNKTIVKEYCIQVKPNESLNLTFIPEITNQFNAFAFINGIEIVSMPSFLYYTNLSDTNYHINSLGFGNNNSESQIRKDKALETVYRVSVGGSQVPSNEDTGMFRYWEDDYPRYSKKQYPPSISSDYLHGLNYVKNTIPNYTAPEAVYLTARTYGMNETHNYNVTWNFEVDSAFTYMVRLHFCEFDSHIKNIGDRVFQIFIANTLAEEKADVIRWSGGNKIPVHKDYAVTMDTQQGSSQIERVNLTIKLQRLPKDMYTIYRDVKLNGIEILKISDNNKNLAGSISKSVDLSNKFSTESPKKFKITTTIGDAIALSSIVLIIVGGVTIFWLRVIVVGIAIFWLRGRFQNFIEGIVPKTKNQGSSSLPPHFCRYFTLEEIKAATNNFDDVSIIGVGGFGNVYKGFIDRSTPVAIKRLKQGSQQGANEFMNEIELLSQLRHIHLVSLVGYCNDDTEMILVYEFMQHGTLSEYLYGSNNKKLPWKLRLEILLGAARGLRYLHAEVKQKIIHRDVKSTNILLDEKWVAKVSDFGLSKVGPMGISTIHVSTMVKGSVGYLDPEYYMLERLTLKSDVYSFGVVLLEVLCARPPLVRDMDKKTASLALWFQRCYDEGVAIEQIVDPFLRDSIPSGCLKCYCDLALSCLHDDGTQRPSMSQVVRELELALQLVMGEESSQFDKTQTDGTHMKESQVLQSISDKESCMHFTRSRTYKEGTITARPSTQEHFLSNIENSRLRSYSC 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00457 887 Pfam Malectin-like domain 41 424 IPR024788 -
Vivi6g00457 887 Gene3D - 37 199 - -
Vivi6g00457 887 Gene3D - 232 426 - -
Vivi6g00457 887 Gene3D Phosphorylase Kinase; domain 1 505 612 - -
Vivi6g00457 887 FunFam FERONIA receptor-like kinase 232 426 - -
Vivi6g00457 887 ProSitePatterns Protein kinases ATP-binding region signature. 543 565 IPR017441 GO:0005524
Vivi6g00457 887 FunFam receptor-like protein kinase FERONIA 503 612 - -
Vivi6g00457 887 SMART serkin_6 537 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g00457 887 Pfam Protein tyrosine and serine/threonine kinase 542 809 IPR001245 GO:0004672|GO:0006468
Vivi6g00457 887 ProSitePatterns Serine/Threonine protein kinases active-site signature. 657 669 IPR008271 GO:0004672|GO:0006468
Vivi6g00457 887 SUPERFAMILY Protein kinase-like (PK-like) 510 811 IPR011009 -
Vivi6g00457 887 FunFam FERONIA receptor-like kinase 38 199 - -
Vivi6g00457 887 Gene3D Transferase(Phosphotransferase) domain 1 613 835 - -
Vivi6g00457 887 ProSiteProfiles Protein kinase domain profile. 537 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g00457 887 PANTHER OS03G0124300 PROTEIN-RELATED 18 476 IPR046957 GO:0004672
Vivi6g00457 887 CDD STKc_IRAK 543 810 - -
Vivi6g00457 887 FunFam Receptor-like protein kinase FERONIA 613 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00457 Vivi-Chr6 11874291 11877155 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00457 33 848 Receptor kinase-like Gene Family AT3G51550 42.907 0.0 604
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vivi6g00457 Malectin_like 9.9e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00457 - - mtr:25497555 1224.15