Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00449 ATGTCTGTAAACGGTTCGAAATCTATGAAAGATGAAAAGAATGATTTGCAGAAGCAGATTGGATGCATCACTGGATTTTTCCAGCTCTTTGATCGCCACCGTTTCATTACCGGCCATCGCACAAGCAGTTACATTCCGAATTCATCTACTTCAGATGCAAAGAATCAAAAAATTGCAAAAGAGAAGCCACACTTCTCTACGGAATCATCGATAACATCCGTGTCTTCATCGTCACGTTCATCTAGCATGTCTTCTATTGATTTCAATAAAATAATCAAGATTGAATCATCATCAAACAAACAAAACCAAATTCCGAAAAAATCACATTCAAGGCATCAATCACTTGATTTCTATGATGTTGTCAAAGATTCAATGCATAGAGAAGCTAAAAGTTTATATGTGAAAACATTAATCAAGGAAGAGAAAAAGGTTGAAGCTTATGCATTGAAGAATCAACACATAGACTCTCCGAGGCCTATGCTATCGATGAAATCTTCCGATGGAGGAGTTAAGGTTTCGAAAGAACCGTTACATAATCTTTCGAGGTCGAGAAAACCACACTGGGACTCGCCGCGACTCTCTTATGATGCGGTGAAATCCGCCACAGTGCATAAGGAAGTTCCTAGGTTTTCCTTGGACAGCAAGCAAGGTTCCGTTAGACGGATCAACGAAGGAAACAAGGCTCGCAACGTGTACGAGAGAAACTCAACGAGCCAGTTGCAAGAATTAGAAACACCAAGAAGATCATCAAGTGTTGTTGCTAAGTTGATGGGACTAGAAGCTCTCCCGGACTCGACGCAAACTTGTCGGACGTCTATCTGCTCAACCGATCAAATAGATCTTACCGCAAGAGCCAGCACAAATGATGAATACAAGAAACACCAAAGTTCGCCCTCCCCGAGAAATAGAAGGGATGATGTTTCAATCAAAAATGTGAAACAACATTCGCGATTCGCGCTAGAATCGACAACTTCGCCAAGGCAACCTGATGCCAACCAAAGTTCTGATACAAAAGCATCAAAGTCTTCGCTTTCTGTATACGGACAAATCGAAAAAAGGCTAGCAGAACTCGAGTTCAAAAAGTCGGGAAAGGATCTACGAGCCCTTAAACAGATTCTTGAAGCAATGCAGAGATTTTCAGATTCATCATCTGACACTAAGAACAATAACACTAGTCTCGACGAAAGTTCTAAAGCAAAAAGCCCGAGAATACAACAAAAGGACTCGGAATTCGTCACGGTTGAGTCATCATCGAATTCAACCCGTGATAGGAAATCGCCAATTGTCATCATGAAACCAACAAAAGTGACTAGAAAAGCCAATAATACTCCTTCAACAGAATTTTCAATTCATCAAAGATTGGTTGATAAACAAAAAGCTAAAGGTATTGTCTCAACAGAAAAACCATCAAAGACTTCTCAAGACAGAAATGGAAGAAACACCATCAGCTTCGGTAACATAACGGTAACCGGGAGTCCAAGACTGCAGAAGAAGTTTGGATTCGAGACGCGTTCTCCACCGGCTAGTCCATCATCCGATTCCACGATTAACAGAAGACAACATAATAGGCAACTTGTGGACCTGCCGAGTTCTTCGTGTTCACCACATAGACACGATTTCTCCGTTTTGCAGGATAGAGATGAACATTTTAGCGACACAAGTTCTTTGAGAAAATTTAAGCATCATGTTAATGTCATTTCTTCCGATTTTGACAGCAACAGAAGCTTGGACACTCTAGAAATTGTTCGGATCGATCAATCAGCGAATATCAACCAAAATGATGAATTTGAATACTCGAGGAATGAACACTCTAAGGCCGATAAAATTGTCACTCCTGAACAGCCGAGTCCTGTATCTGTTCTTGATGCTGCATTCTATCAGGAAGATCCACCGTCTCCGGTGAAAAAGATATCGAATATTTCAAAAAAATTAGATGAAGCTTTAAGCATTGGTCTTGATAGTGAGAAGAACTCCGTGGATCAAATTCTGCGAGAAATTGATTGGAACGATGAAAAACTCGTGAATTTCAACAACATCGAGAATCCTGATCATAAGTATATATCAGAAATACTAATAGCTTCCGGTCTAGTCAATCATCGAAACTCTAACGAGTTACTTCATTCACAAGGCACCTTGATTAACCCGAAATTATTCTTAGCACTTGAACAAATGAAGACAAATACATCAAATACGACGCGATTCAATATTGAAGACGGTGCGAAGAACATTTTCATTGCTAATAGTCCTGAGAAACTGCGAAGAAAACTCATATTCGATGTGGTCAACGACATTTTAGCAGAGAGAAAGGTAAAAGGGAAGAAGCTTTTCGAAGAGCTATGTATAGAAATAGATGAGCTACAACCGAAAAACAAGAATATCGACATTTTTCACGAGGATGAGAATTCGATAAGTCTATTGTGCAGAGATTTGAAGGATCGGAATACAGTTTGGACTAACCGTGGCAGCGAGAAACCGAATATCGTGCTGGATATCGAACGGTCGATTTTTAGAGATTTGATAACTGAAGTTTGTGAGAGATGA 2541 0.3998 MSVNGSKSMKDEKNDLQKQIGCITGFFQLFDRHRFITGHRTSSYIPNSSTSDAKNQKIAKEKPHFSTESSITSVSSSSRSSSMSSIDFNKIIKIESSSNKQNQIPKKSHSRHQSLDFYDVVKDSMHREAKSLYVKTLIKEEKKVEAYALKNQHIDSPRPMLSMKSSDGGVKVSKEPLHNLSRSRKPHWDSPRLSYDAVKSATVHKEVPRFSLDSKQGSVRRINEGNKARNVYERNSTSQLQELETPRRSSSVVAKLMGLEALPDSTQTCRTSICSTDQIDLTARASTNDEYKKHQSSPSPRNRRDDVSIKNVKQHSRFALESTTSPRQPDANQSSDTKASKSSLSVYGQIEKRLAELEFKKSGKDLRALKQILEAMQRFSDSSSDTKNNNTSLDESSKAKSPRIQQKDSEFVTVESSSNSTRDRKSPIVIMKPTKVTRKANNTPSTEFSIHQRLVDKQKAKGIVSTEKPSKTSQDRNGRNTISFGNITVTGSPRLQKKFGFETRSPPASPSSDSTINRRQHNRQLVDLPSSSCSPHRHDFSVLQDRDEHFSDTSSLRKFKHHVNVISSDFDSNRSLDTLEIVRIDQSANINQNDEFEYSRNEHSKADKIVTPEQPSPVSVLDAAFYQEDPPSPVKKISNISKKLDEALSIGLDSEKNSVDQILREIDWNDEKLVNFNNIENPDHKYISEILIASGLVNHRNSNELLHSQGTLINPKLFLALEQMKTNTSNTTRFNIEDGAKNIFIANSPEKLRRKLIFDVVNDILAERKVKGKKLFEELCIEIDELQPKNKNIDIFHEDENSISLLCRDLKDRNTVWTNRGSEKPNIVLDIERSIFRDLITEVCER 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00449 846 MobiDBLite consensus disorder prediction 500 519 - -
Vivi6g00449 846 MobiDBLite consensus disorder prediction 286 312 - -
Vivi6g00449 846 MobiDBLite consensus disorder prediction 41 82 - -
Vivi6g00449 846 MobiDBLite consensus disorder prediction 221 249 - -
Vivi6g00449 846 MobiDBLite consensus disorder prediction 379 488 - -
Vivi6g00449 846 MobiDBLite consensus disorder prediction 229 248 - -
Vivi6g00449 846 MobiDBLite consensus disorder prediction 379 399 - -
Vivi6g00449 846 Pfam DUF761-associated sequence motif 251 266 IPR032795 -
Vivi6g00449 846 MobiDBLite consensus disorder prediction 285 344 - -
Vivi6g00449 846 MobiDBLite consensus disorder prediction 505 519 - -
Vivi6g00449 846 MobiDBLite consensus disorder prediction 436 451 - -
Vivi6g00449 846 PANTHER LONGIFOLIA PROTEIN 1 844 IPR033334 GO:0051513
Vivi6g00449 846 MobiDBLite consensus disorder prediction 465 488 - -
Vivi6g00449 846 MobiDBLite consensus disorder prediction 406 425 - -
Vivi6g00449 846 MobiDBLite consensus disorder prediction 315 344 - -
Vivi6g00449 846 Pfam Domain of unknown function (DUF4378) 683 842 IPR025486 -
Vivi6g00449 846 MobiDBLite consensus disorder prediction 65 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00449 Vivi-Chr6 11734064 11737951 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00449 189 844 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 30.880 2.66e-63 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00449 - - vvo:131608904 1627.84