Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00440 ATGGCAAAAATCATAGAAATTTTCAATGTCTCACCATCTTCACCACAAGAACTACCTTCACAAACTTCACTTCCTCTTACATTCTTTGACATACTATGGTTAAGATTACCACCTGTTCAAAGAATCTTCTTCTATGAATTTCCACACCAGCCTTCTCTTTTCTTCAACACCCTTCTTCCCAAACTCAAACAATCTCTTTCTCTTGCACTTTCTCACTTTTATCCTCTTTCAGGTCATCTCATATGGCCTCTTGACTCTCACAAACCAATCATCAAGTACATCAAAGGAAACTCTCTTTCACTCACTGTAGCTGAATCTGATGCAGATTTCAATCTTCTATCAGGTAATGATCTTTGTGAAGCTACAAAAGTTCATCATCTTTTATCTAACTTGAATATCTCACATGATCATGCTTCTATTCTTGCGCTTCAAGTTACTCTTTTTCCAAACTATGGTTTTTCAATTGGTGTCACTTCACATCATGCTGTTTTAGATGGTAAAAACTCAACTTCTTTTATCAAATCATGGGCTTATCTATGTAGAAACCTTGAATCAATATCCGAATCAACGCTTTCGTTGCCGAACGAATTTCGGCCTTTCTATGATAGAAAAGTTATCAATGATCCAGATGGATTAGAAGCTAAATACTTGAGTGCTTGGTTAAAGCAAGGTGGAACAAACAACAGAAGCTTAAAGGTTTGGGATCTTGAAGTTCCAGAAGATTCAGTTAGAGGGTTGTTTCAATTATCTAGATTGGATATCGAAAAGCTCAAAAAATTTGTAGTGTCAAAACAAAAGGGTGCTAGGAATGAGAATGAAAATCTTCACTTGTCAACTTTTTTGGTATCTATTGCATATGCATGTGTATGTAGAGTGAAAGCAGAAGAGATTAAGAACAAAAATGTTATCATTGCTTTGAATATCGATTGCAGGAATCGGTTAGATCCGCCGATTCCTGCAACATATTTCGGAAACTGTATAGGAGCAAGACTTGCAGTTGTTGAAACAAGTGAGATATTGGGAGAAGATGGACTAATTGTGGTTGTTAAACTTTTAAGTGAGGCTTTGGAAACTCTAAAAGATGGAGTGTTGAATGGAGCTGAAGATTGGTCTTCATGGTTACTTGATGGTGTTGCCATTGCTGATGTTAAAACTAGTGGTACTGCTGGTTCACCTAAGTTTGAGGTTTATAGCACTGATTTTGGGTGTGGAAAACCAAAAAAAGTTGAAATGGTTTCTATTGATAGAACTGGTGCAATTTGTATTTCTGATTGTGGAAATGGTGATGGTGTTGAGATAGGTATTGTGGCTAAGAAGAAAGCTATGGAAGCTTTTGCTTCTCTCTTTGTCAATGGGATTACATCTTGA 1368 0.3655 MAKIIEIFNVSPSSPQELPSQTSLPLTFFDILWLRLPPVQRIFFYEFPHQPSLFFNTLLPKLKQSLSLALSHFYPLSGHLIWPLDSHKPIIKYIKGNSLSLTVAESDADFNLLSGNDLCEATKVHHLLSNLNISHDHASILALQVTLFPNYGFSIGVTSHHAVLDGKNSTSFIKSWAYLCRNLESISESTLSLPNEFRPFYDRKVINDPDGLEAKYLSAWLKQGGTNNRSLKVWDLEVPEDSVRGLFQLSRLDIEKLKKFVVSKQKGARNENENLHLSTFLVSIAYACVCRVKAEEIKNKNVIIALNIDCRNRLDPPIPATYFGNCIGARLAVVETSEILGEDGLIVVVKLLSEALETLKDGVLNGAEDWSSWLLDGVAIADVKTSGTAGSPKFEVYSTDFGCGKPKKVEMVSIDRTGAICISDCGNGDGVEIGIVAKKKAMEAFASLFVNGITS 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00440 455 Gene3D - 1 232 IPR023213 -
Vivi6g00440 455 Gene3D - 237 454 IPR023213 -
Vivi6g00440 455 Pfam Transferase family 11 447 - -
Vivi6g00440 455 PANTHER - 2 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00440 Vivi-Chr6 11271770 11273267 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00440 42 445 Monolignol Biosynthesis Gene Families AT5G48930 24.221 3.95e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00440 - - mtr:11418791 744.962