Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00437 ATGGCATACAACAAAAACAACATTAAAATCTATGAACATGTCAAAGTTGTTCCACCATCATCATCAACCCAATCAACAACCACAACCCCTCTCACTTCGTATGACCTAATTTTTCTAAGGTTCCACCCATCCGAGCGAATCTACTTTTACACACTCCATGATCCACACTCTCACCCTTCATGTTTCTTTCATGAAATTGTTCCAAATCTAAAATCTTCGCTCTCTTTAACCCTCCAACACTTTCTCCCTTTAGCTGGTAAAATCGTTTGGCCTTCTGATTCTTCAAAACCATTCATCCAATTCATTTCAAATGATGATGATAATGGAGTTTCGTTGCTCATTGCAGAATCTGATGCTGATTTTGATCATGTCATTGAAAATTCACCGCATGAAGCTTCTTTGACTCGCTCTTTTATTCCTAACTTGGAATCATCAGATTTGTTTGCTTCTACTATGTCGCTCCAAATCACTCTTTTTCCAAATTGTGGCTTTAGCATAGGAATCACGCAACACCATGCTATTTTTGATGGAAAATCTTTATCCATGTTCGTCAAAGCTTGGGCTTATCTATGCAACAAAATAATTGGATTTGAAACACCAACTTTGTTGCCAGAGTTAGAGCCTTTATTCAACAGAGATATCATCAAAGGCGCGAATGAAAAAAATGCAATCGAGATTTTATCCAGGATATCTCCAACTGAAAAAGGAAATGAAAGAAGCCTAAAGATTTTTCTTGCTGAACCAAAACTCGAAGACTCTGTCCGTGCTACATTCAAGCTCTCACGTGAAAACTTGGATAAGATAAAGCAAAATGTGTTATCCAAATGGGAAATATTCGACGCAAATGAATCAAAGCCACACACTCTATCAACTTTTATTCTCACTTGTGCTTATTCCATTGTTACTATTGCAAAAGCTATTCATGGAGTTGAAAAAGAGAAAGAAAAGTTTGGTTTTACTTTTCCAATAGATTATAGAGCAAGGTTGGAACCACCATTACCAAATAACTATTTTGGAAACTGTATATGGGGGAATTTCATTCGTTTAGATTCATTTGATTTCGAAAAAGAAGATGGTGTCTTTGTAGTAGCCAAGTGTATTTATGAGAAAATAAAGATGATAAATGAAAAGGGAATTCTAAAAAGAGAGAAAATTGGTGATAAAGATAAATCTATACATAATGAGGGATATACAAAAGTTGCAGTGGCTGGGTCTAATAGATTTAGTGTTTATGAGAATGATTTTGGTTATGGAAGGCCAGAAAAGGTGGAAATAGTGTCGATCGATAGAGGTTTAATAATTGGTTATGGAGATAGCAAAGATGGTAATGGTGGAGTTGAAATTGGTCTCGTTCTAAATAAAGATGTAATGGATCTCTTTAGCACTTTGTTTTTTGAAGGACTATGTGATAATTGA 1416 0.3538 MAYNKNNIKIYEHVKVVPPSSSTQSTTTTPLTSYDLIFLRFHPSERIYFYTLHDPHSHPSCFFHEIVPNLKSSLSLTLQHFLPLAGKIVWPSDSSKPFIQFISNDDDNGVSLLIAESDADFDHVIENSPHEASLTRSFIPNLESSDLFASTMSLQITLFPNCGFSIGITQHHAIFDGKSLSMFVKAWAYLCNKIIGFETPTLLPELEPLFNRDIIKGANEKNAIEILSRISPTEKGNERSLKIFLAEPKLEDSVRATFKLSRENLDKIKQNVLSKWEIFDANESKPHTLSTFILTCAYSIVTIAKAIHGVEKEKEKFGFTFPIDYRARLEPPLPNNYFGNCIWGNFIRLDSFDFEKEDGVFVVAKCIYEKIKMINEKGILKREKIGDKDKSIHNEGYTKVAVAGSNRFSVYENDFGYGRPEKVEIVSIDRGLIIGYGDSKDGNGGVEIGLVLNKDVMDLFSTLFFEGLCDN 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00437 471 Gene3D - 250 469 IPR023213 -
Vivi6g00437 471 Gene3D - 3 231 IPR023213 -
Vivi6g00437 471 Pfam Transferase family 15 461 - -
Vivi6g00437 471 PANTHER - 8 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00437 Vivi-Chr6 11101874 11103702 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00437 20 466 Monolignol Biosynthesis Gene Families AT5G48930 22.979 5.12e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00437 - - tpra:123889238 608.216