Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00434 ATGGCATCCAACAAAAACAACATTAAAATCCATCAACATGTCAAAGTTGTTCCACCATCATCATCAATCCAATCAACAACAACAACCCCTCTCACTTTGTATGACATAATCTGGCTAAGGTTTCATCCGTCAGAGCGAATCTACTTTTATGCACTCCGTGATCCACACTCTCACCCTACTTTTTTCTTTCAAGAAATTGTTCCAAATCTAAAATCTTCACTCTCTTTAACCCTTCAACACTTTCTCCCTTTAGCTGGTAAAATCGTTTGGCCTTCTGATTCTTCAAAACCATTCATCCAATTCAATCCCAATGATGATGATAATGGAGTTTCATTACTCATTGCAGAATCTGATGCTGATTTTAATCATGTCATTGAAAACTCACCCCATGAAGCTTCTTTGACTCGCTCTTTTATTCCCAACTTAGAATCATCAGATGCGTTTGCTTCTACTATGTCCCTCCAAATCACTCTTTTCCCAAATTGTGGCTTTAGCATAGGAATCACGCAACACCATGCTATTTTTGATGGAAAATCATTATCCATGTTCGTCAAAGCTTGGGCTTATCTATGCAACAAAATAATTGGATTTGAAACACCAACTTTGTTGCCAGAGTTAGAGCCTTTATTCAACAGAGATATCATCAAAGACAAAAATGAAAAAAATGCAATCGAGATTTTATCCAGGATATCTCCAACCGAAAAAGGAAATGAAAGAAGCCTAAAGATTTTTCCTTCTGAACCAAAACTCGAAGAATCTTCCCGTGCTACGTTCAAGCTTTCACGTGAAGATTTGGATAAAATAAAGCAAAATGTGTTATCCAAATGGGAAATATTCGATACAAACAAATCAAAGCCACAAACTCTATCCTCTTTTATTCTCACTTGTGCTTATTCAGTTGTTACTATTGCAAAAGCTATTCATGGAGTTGGAAAAGAGAAAGAAAAGTTTGCTTTTACTTTTGCAGTAGATTGTAGAGCAAGGTTAGAACCACCATTACCAAATAATTATTTTGGAAACTGTGTATCGGGCGATTTCATTCATCTAAAACCATTTGATTTCGAAAAAGAAGATGGTGTCTTTGTAGTTGCGAAGTGTATTTATGAGAAAATAAAGATGATAAATGAAAAGGGAATTCTAAACAGAGAAAAAACAGGTGATAGATATAAATCTATATATAATGAGGGATATAAAAAAGTTGGGGTGGCTGGGTCTAATAGATTTTCTGTTTATGAGAACGATTTTGGTTATGGAAGGCCAGAAAAGGTGGAAATAGTGTCGATCGATAGAGGTTTAGGATTTGGTTATGGAGATAGCAAAGATGGCAATGGTGGAGTTGAAATTGGTCTGGTTCTGAATAAACATGTAATGGATCACTTTAGCAAAATGTTTCATGAAGGACTATGTTGTAATTGA 1416 0.3545 MASNKNNIKIHQHVKVVPPSSSIQSTTTTPLTLYDIIWLRFHPSERIYFYALRDPHSHPTFFFQEIVPNLKSSLSLTLQHFLPLAGKIVWPSDSSKPFIQFNPNDDDNGVSLLIAESDADFNHVIENSPHEASLTRSFIPNLESSDAFASTMSLQITLFPNCGFSIGITQHHAIFDGKSLSMFVKAWAYLCNKIIGFETPTLLPELEPLFNRDIIKDKNEKNAIEILSRISPTEKGNERSLKIFPSEPKLEESSRATFKLSREDLDKIKQNVLSKWEIFDTNKSKPQTLSSFILTCAYSVVTIAKAIHGVGKEKEKFAFTFAVDCRARLEPPLPNNYFGNCVSGDFIHLKPFDFEKEDGVFVVAKCIYEKIKMINEKGILNREKTGDRYKSIYNEGYKKVGVAGSNRFSVYENDFGYGRPEKVEIVSIDRGLGFGYGDSKDGNGGVEIGLVLNKHVMDHFSKMFHEGLCCN 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00434 471 PANTHER - 8 468 - -
Vivi6g00434 471 Gene3D - 3 232 IPR023213 -
Vivi6g00434 471 Gene3D - 251 470 IPR023213 -
Vivi6g00434 471 Pfam Transferase family 15 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00434 Vivi-Chr6 11047680 11049236 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00434 20 466 Monolignol Biosynthesis Gene Families AT5G48930 23.567 8.79e-19 86.7