Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00433 ATGGCTTCCTACAAAAACAACATTAAAATTCATGAACATGTCAAAGTTGTTCCTCCATCATCATCAAACCAATCAACAACAACAACGCCTTTAACTTTCTTTGACATAATATGTTTAAGGTTCCATCCTGTAGAGCGTATCTTCTTCTACACACTCCCAAATTCACAATCACACCCTTCTTTCTTTTTCCAAAAAATTGTTGTAAATCTCAAGTCTTCGCTCTCTTTAACCCTCCAACACTTTCTCCCTATAGCTGGTAAAATCGTCTGGCCTTCGGATTCTTCAAAACCATTCATCCAATTCAATCCCAATGATAATGATAATGGAGTTTCTTTGCTCATAGTAGAGTCTGATGCCGATTTCAATCATGTCATTGGTAATTCACCCCATGAAGCTTCTTTGTCACGTTCTTTTATTCCTAACTTGGAATCATCAGATTCGTTTGCTTCTATTATCTCCTATGAAGCACGGACACCTCTAAGAGTAGGCGTGTCGCGGTATTATCTCACTCCAAATCACCATGGTGTTTTTGATGGAAAGTCTTCATCCATGTTCATCAAAGCTTGGGCTTATCTATGCAACAAAGAATCACCAACTTTGTTGCGAGAGTTAGAGCCTTTACTCAATAGAGATTTCATCAAAGACACAAATGAAAATAACTCAATCGAGATGTTATCCAAGATATTCCCGAGTGAAAAAGGAAACGAAAGAAGCCTAAAGATTTCTCCTTTTGAACCAAAATTCGAAGAATCTGTCCGTGCTACGTTCAAGCTCACACGTGAAGATTTGGATAAAATAAAGCAAAGGGTGTTATCCAAATGGGAATTATTCGATACAAATGAATCAAAACCGCATACTCTATCCTCTTTTATTCTCACTTGTGCTTATTTGATTGTTACTATTGCAAAAGCTATTAATGGAGTTAAAAAAGAAAAAGAAAAGTTTTCTTTTATGTTTGCAGTAGATTGTAGAGCAAGGTTGGAAGCGCCAATACCAAGTAACTATTTTGGAAACTGCGTATCGGGGCATTTTATTGATACAGATCCATTGGATTTCAATAAAGAAGATGGTGTCTTTGTAGTTGCTAAGTGTATTTATGAGAAAATAAAAATGATAAAAGAAAAGGGTGTTTTTGAAGGAAAAATTTTGGATGTGTTTGTTAAATATTATTCTTTAAATAGTGAAGGATATGAAATCATAGGAGTGACAGGTTCTAATAGGTTTGGTGTTTATGAGATTGATTTTGGTTTGGGAAGGCCGGAAAAGGTGGAGATAGTGTCCACTGATAGAAGTTTAACAATTGGTTTGGCAGAGAGTAAAGATGGCAATGGTGGAGTTGAAGTTGGTCTTGTTCCCAATAAACATGTAATGGATCTCTTTAGCACTTTGTTCCTTGAAGGACTATGA 1407 0.3603 MASYKNNIKIHEHVKVVPPSSSNQSTTTTPLTFFDIICLRFHPVERIFFYTLPNSQSHPSFFFQKIVVNLKSSLSLTLQHFLPIAGKIVWPSDSSKPFIQFNPNDNDNGVSLLIVESDADFNHVIGNSPHEASLSRSFIPNLESSDSFASIISYEARTPLRVGVSRYYLTPNHHGVFDGKSSSMFIKAWAYLCNKESPTLLRELEPLLNRDFIKDTNENNSIEMLSKIFPSEKGNERSLKISPFEPKFEESVRATFKLTREDLDKIKQRVLSKWELFDTNESKPHTLSSFILTCAYLIVTIAKAINGVKKEKEKFSFMFAVDCRARLEAPIPSNYFGNCVSGHFIDTDPLDFNKEDGVFVVAKCIYEKIKMIKEKGVFEGKILDVFVKYYSLNSEGYEIIGVTGSNRFGVYEIDFGLGRPEKVEIVSTDRSLTIGLAESKDGNGGVEVGLVPNKHVMDLFSTLFLEGL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00433 468 PANTHER - 8 468 - -
Vivi6g00433 468 Gene3D - 3 232 IPR023213 -
Vivi6g00433 468 Pfam Transferase family 15 460 - -
Vivi6g00433 468 Gene3D - 248 468 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00433 Vivi-Chr6 11042598 11044554 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00433 20 420 Monolignol Biosynthesis Gene Families AT5G48930 23.709 1.46e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00433 - - tpra:123889238 630.172