Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00428 ATGGCTGTAGAGGAATCTGAGAAAATGATTCCGGAGTTAGAAAGAGAGGAGGATTTGATTGCGGCAGCTCGGCATATTGTGGAGGCGTTAGGTTCGAATAAGAATCTTACTAGTGATGCTAAGAAGATTTTGGCGGATCTTGGATCGCGGTTGTCTTCGATGAATATAGAGAATGAAAAGGAGGAGAGGAAGATAGGGAAAACCGAGGGTGATATCGATGGGGGAGAGGAGGTGGATGATGAGGAGGAGGAAGAAGAGGGTGTCGGTGTTATTGAAAAACGACTTGGTTTGATCCAGGAGAAGATAATGAAATGGGAGGAAGATGAGTCGATGATTTGGGATTCGGGACCTGAGGAATCGTCTGAGTATTTGAATGCGGCTAATGAAGTGCGGATGTTGATCGAGAAGTTGGAGAGTATGCATTTGAGTAAAGAGGATCAAGAGTATAAGTTTTTGCAAAGGGCTCATAGTGTTCTTCAGACGGCGATGACGCGGCTCGAAGATGAGTTTAGTAACTTGCTTATCAAGAATAGGCAACCTTTTGAGCCGGAGTATGTCTCTTTTCGGTCGAGCGAGGAAGATGCTGCTGATGGGAATTCGTTTGTCTCTTTAGGTGATGATTCGTTTGAGGAATCACTTCGAAGAGATAGTGTTAGCCGAGCCGCTGAGGAGCATATCATTGATTTAGTTCATCCGGACGTAATCCCCGATCTCAGGTGTATTGCGAACTTGCTTTTTGCTTCGAATTATGCGAAGGAATGTACGCAAGTTTACACCATTGTTCGGAGAGATGCTTTAGACGAATGTTTGTTCATTCTTGAAATGGAAAGGCTTAGTATCGAAGATGTCTTGAAAATGGAATGGAATACTTTGAATTCGAAGATCAAACGATGGATTTGGGCTGTGAAAATCTTTGTTCGGGTTTATCTTGCGAGTGAGAGGTGGCTTAGCGACCAGATTTTCGGAGAAGGCGAGCCTGCTAGTCAAGAGTCTTTTGTCGATGCATCGAAAGCTTCAATTTTGCAGCTTCTGAATTTCGGCGAAGCGATGTCTATCGGTCCTCACAAACCCGAAAAGTTGTTTCGAATTCTCAACATGTATGAAGTTCTCGCAGGCCTTATGCCAGACATCGATGCTTTGTATTCGGACGAGGTTGGTTCCTCGGTTAAATTTGAATGTCACGAGGTTCTGGATAGATTGGGAGATTGCGTGAGGATAACATTTCTCGAATTCAAAAGTGTCGTTGAATCGAATCCGTCAGTAACACCTTTAAATGGCGGTGGAATACATCCTTTAGCGAGGTATGTTATGAATTATCTTCGAACTCTCGCCGATTACGGCGAAGCGCTAAATCATCTTCTAAAAGACCAAGAAGAAGAGGATGTCGTTTCGTCGTCACCCGACACGAGTCCAGGTACCGAAGAAGACAACAGAAGCCAAGATTCTCCCGGTAGATTTCCATCAATGGCGCGACAATTCCTGTCTTTCGCTTCCGTCTTGGAAAACAATCTCGAAGAGAAATCAAAGCTTTACAAAGAAACCTCACTGCAGCACTTGTTCTTAATGAACAACCTTCATTACATGGCTGAAAAGGTCAAAGGACCCGAACTCCGGATAATATTCGGCGACGAATGGATCCGAAAACACAACTGGAAGTTTCAGCAGCACGCGATGAAATACGAGAGAGCCTCTTGGAGTTCGATTCTCAGCTTACTTAAGGACGAAGGAATCCACGCGCCCGGTTCAAACTCCGTCTCGAAAACTCTTCTGAAGGAGAAGCTACGAAGCTTCTACCTCGGCTTCGAGGATATTTACAGAATCCAAACAGGTTGGTCGATTCCGGATGTTCAGCTTCGCGAAGATTTGCGGATATCGATATCGGTGAACTTGATTCAAGCTTATAGGACATTTGTTGGAAGGCATAATAGTCACATTAGTGACAGGAATATTAGATACAGTGCTGATGATTTAGAGAATTATCTTTTGGATTTCTTTGAGAATTCTCAAAAGTTGTTGCAAAATCCTCTTAGGAGGTGA 2037 0.4389 MAVEESEKMIPELEREEDLIAAARHIVEALGSNKNLTSDAKKILADLGSRLSSMNIENEKEERKIGKTEGDIDGGEEVDDEEEEEEGVGVIEKRLGLIQEKIMKWEEDESMIWDSGPEESSEYLNAANEVRMLIEKLESMHLSKEDQEYKFLQRAHSVLQTAMTRLEDEFSNLLIKNRQPFEPEYVSFRSSEEDAADGNSFVSLGDDSFEESLRRDSVSRAAEEHIIDLVHPDVIPDLRCIANLLFASNYAKECTQVYTIVRRDALDECLFILEMERLSIEDVLKMEWNTLNSKIKRWIWAVKIFVRVYLASERWLSDQIFGEGEPASQESFVDASKASILQLLNFGEAMSIGPHKPEKLFRILNMYEVLAGLMPDIDALYSDEVGSSVKFECHEVLDRLGDCVRITFLEFKSVVESNPSVTPLNGGGIHPLARYVMNYLRTLADYGEALNHLLKDQEEEDVVSSSPDTSPGTEEDNRSQDSPGRFPSMARQFLSFASVLENNLEEKSKLYKETSLQHLFLMNNLHYMAEKVKGPELRIIFGDEWIRKHNWKFQQHAMKYERASWSSILSLLKDEGIHAPGSNSVSKTLLKEKLRSFYLGFEDIYRIQTGWSIPDVQLREDLRISISVNLIQAYRTFVGRHNSHISDRNIRYSADDLENYLLDFFENSQKLLQNPLRR 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00428 678 Gene3D Exocyst complex component Exo70 100 673 - -
Vivi6g00428 678 MobiDBLite consensus disorder prediction 55 87 - -
Vivi6g00428 678 Coils Coil 149 169 - -
Vivi6g00428 678 PANTHER EXOCYST COMPLEX PROTEIN EXO70 89 666 IPR004140 GO:0000145|GO:0006887
Vivi6g00428 678 MobiDBLite consensus disorder prediction 73 87 - -
Vivi6g00428 678 Pfam Exo70 exocyst complex subunit 296 662 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vivi6g00428 678 SUPERFAMILY Cullin repeat-like 107 666 IPR016159 -
Vivi6g00428 678 Coils Coil 44 64 - -
Vivi6g00428 678 MobiDBLite consensus disorder prediction 457 484 - -
Vivi6g00428 678 MobiDBLite consensus disorder prediction 55 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00428 Vivi-Chr6 10750876 10753677 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00428 12 678 EXO70 exocyst subunit family AT3G29400 47.941 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00428 K07195 - gmx:100799102 1059.67