Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00416 ATGGCTTCATCAATACATAACCGCAAACCAAGTGAAATCCTCAAAGGACAAGTTCAGCTATACAGATACATTTATGGATTGCTAGATTCCATGTGTCTCAAATGGTGCATTGAAATGAACATACCAAATATTATCCATGATCATGCCAAACCAATTTCTCTTTCAGACCTAGTTTCAGTTCTTAAAGTTCCGTCAACCAAATTCGGTAACGTTCAACGTCTCATGCGTTACCTCGCACACAACGGAATCTTTGAGATCATAACAAATCAAGAGATAGAAAATAAAGAAGAAGCGTACGCTCTCACCGTCGTCTCAGAGCTTCTTGTTAAAGGGAGTGAACTATGTTTATCACCGATGGCTGAAGGCTATTTGAATCCAACTATTTCGGGTTCTTACAATCACTTAAAAAAATGGATTTACGAGGACGATCTTACACTCTTTGATGTAACATTAGGATCTGATTTGTGGAAGTTTCTTAATCAAAACCCGGAAAATAATAGATCGTTTAACGAGGCAATGGCGAGTGATTCCAAAATGATAAATTTGGTTTTGAAAGATTATGGTTTTGTGTTTGGTGGGTTGGAATCAATTGTGGATGTTGGTGGTGGAAATGGGACAATGGGGAAGATTATTTGTGACACATTTCCTAAGTTGAAATGTGTTGTGTTTGATCTTCCACATGTTGTAGGGAATTTATCTGGTGATAACAATTTGAGTTATGTTGGAGGAGACATGTTCAAATCTATTCCTAGAGCTGATGGAATTGTACTTAAGTGGATTTTACATGATTGGACTGATAAGGATTGCATAAAAATATTGGAGAAATGTAAGGAAGCTATTACAAGTGATGAAAAAGTTGGAAAAGTGATTCTCATAGAAATTGTGATGAATGAAAAGAAAGATGATCATCAAGTTACACAATTAAAGATGCAAATGGATATAAACATGGCATGTGTCAATGGAAAAGAGAGAAATGAGAAAGAATGGAAGAAACTCTTTGTGGAAGCAGGGTTTAAAGACTACAAAATATCTCCTTTGACTGAATTATTGTCTCTTATTGAAGTTTATCCCTAA 1074 0.3566 MASSIHNRKPSEILKGQVQLYRYIYGLLDSMCLKWCIEMNIPNIIHDHAKPISLSDLVSVLKVPSTKFGNVQRLMRYLAHNGIFEIITNQEIENKEEAYALTVVSELLVKGSELCLSPMAEGYLNPTISGSYNHLKKWIYEDDLTLFDVTLGSDLWKFLNQNPENNRSFNEAMASDSKMINLVLKDYGFVFGGLESIVDVGGGNGTMGKIICDTFPKLKCVVFDLPHVVGNLSGDNNLSYVGGDMFKSIPRADGIVLKWILHDWTDKDCIKILEKCKEAITSDEKVGKVILIEIVMNEKKDDHQVTQLKMQMDINMACVNGKERNEKEWKKLFVEAGFKDYKISPLTELLSLIEVYP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00416 357 FunFam O-methyltransferase ZRP4 110 357 - -
Vivi6g00416 357 PANTHER O-METHYLTRANSFERASE 14 342 IPR016461 GO:0008168
Vivi6g00416 357 Pfam O-methyltransferase domain 132 339 IPR001077 GO:0008171
Vivi6g00416 357 Gene3D Vaccinia Virus protein VP39 109 357 IPR029063 -
Vivi6g00416 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 357 IPR016461 GO:0008168
Vivi6g00416 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 356 IPR029063 -
Vivi6g00416 357 SUPERFAMILY "Winged helix" DNA-binding domain 10 112 IPR036390 -
Vivi6g00416 357 Gene3D - 1 108 IPR036388 -
Vivi6g00416 357 FunFam Coniferyl alcohol 9-O-methyltransferase 3 108 - -
Vivi6g00416 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Vivi6g00416 357 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00416 Vivi-Chr6 10480253 10481910 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00416 31 343 Monolignol Biosynthesis Gene Families AT5G54160 32.710 2.58e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00416 K22588 - ag:AAC49926 532.332