Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00415 ATGGCTTCTCTGGAAAATCACATAAAAATCCATGAACACTGCAAAGTTTCACCACCATTTGCATCTCAACACTCTCTCCCTCTCACATTCTTTGATTTATTTTGGCTAAGATTTCACCCGGTCGAACGTATCTTCTTCTACACCCTCCCGAATTCGCAATCACACCCTTCTTTTTTCTTTCAAACAATTGTTCCAAATCTCAAATCATCACTCTCTTTAACTCTCCAACACTTTCTCCCTTTGGCCGGTAAAATCGTCTGGCCTTCTGATTCTCCAAAACCATTCGTCCAATTCAATCCCGATGAGGACGGAGTTTCCTTGACCATAGCACATTGTGATGAACATGAACATGATGATGATGATCATAGAGTTTTCAATAAACTCTTGGAGTACAATTCACCTCAGGAAGTGTCTTTGTCTCGATATTTCGTACCTCACTTGGATTCAACAGATTCTTTTGCTTCAATTATCTCAATTCAAGTAACCTTTTTTCCAAAAAGTGGTTTTTCCATTGGAATAAGTAGTCACCATGCTGTTCTTGATGGAAAATCTTCAACCATGTTTATCAAAGCTTGGGCTTCAACATGTAAATCTCTTGAAGAAACACAATCTTCACCAAGTTTAAAGCCTTCATTGGAACCATTTTTCGGAAGGGAAGTAATCAATGATCCAAATGATCTTGAAAGTTTGTTTATAAATATTTGGCATGAAATCTCCTACAAAATTGATCCTAATAATAGCACAAAACAAAGAAGCTTGCAGATTATGCTAAAGTCAACAGCATCTCAACATAACTTGGTTCGAGCGACGTTTGAACTCAAACGCGTAGATTTGGAGAAATTAAACAAAAGGGTGTTGTCCAAATGGAACATTGTGGAAAAAGAACCAAAAATGGAAACTTCAAAGCCTAAGAAATTGTCAACTTTTGTTCTTACATGTGCTTATGTGTTTGTGTGCATTGCAAAAGCAAATCAACAAGCAAAGAAGGACAAAGAAGAGAAATTTGCTTGTGGATTCAGTGTGGATTGTAGGGCTAGATTAGATCCTCCAATAGCTCAAAACTACTTTGGAAATTGTGTAAATACACATATAGTAGAAACTGAATATGAGAATTTTACACATGAAGATGGATTGGTGATTGTTGCTAAGAAGATTTATGGTAAAATAAAAAAGATGGATGAGGGAGTTCTTGAAGGGATGGAGACATTGATTTACAGATTAATGGCTATGAAGAGAGAAGGAATACAGACACTAGGAGTTGCTGGTTCAACAAGGCTTGGAGTTTATGAGATTGATTTTGGTTTTGGAAGGCCTGAGAAAGTGGAGATTGCTTCAATTGATAGAGGATTGACAATTGGGTTGGCAGAAAGTAAGGATTTGAAAGGTGGTGTTGAAGTTGGACTTGTTCTTGATAAACATGTGATGGGTGAGTTTCATTCTCTTTTTCATGAAGGATTGTGGTTTGAGGAGTAG 1473 0.3707 MASLENHIKIHEHCKVSPPFASQHSLPLTFFDLFWLRFHPVERIFFYTLPNSQSHPSFFFQTIVPNLKSSLSLTLQHFLPLAGKIVWPSDSPKPFVQFNPDEDGVSLTIAHCDEHEHDDDDHRVFNKLLEYNSPQEVSLSRYFVPHLDSTDSFASIISIQVTFFPKSGFSIGISSHHAVLDGKSSTMFIKAWASTCKSLEETQSSPSLKPSLEPFFGREVINDPNDLESLFINIWHEISYKIDPNNSTKQRSLQIMLKSTASQHNLVRATFELKRVDLEKLNKRVLSKWNIVEKEPKMETSKPKKLSTFVLTCAYVFVCIAKANQQAKKDKEEKFACGFSVDCRARLDPPIAQNYFGNCVNTHIVETEYENFTHEDGLVIVAKKIYGKIKKMDEGVLEGMETLIYRLMAMKREGIQTLGVAGSTRLGVYEIDFGFGRPEKVEIASIDRGLTIGLAESKDLKGGVEVGLVLDKHVMGEFHSLFHEGLWFEE 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00415 490 Gene3D - 7 247 IPR023213 -
Vivi6g00415 490 PANTHER - 8 486 - -
Vivi6g00415 490 SUPERFAMILY CoA-dependent acyltransferases 301 460 - -
Vivi6g00415 490 Gene3D - 263 488 IPR023213 -
Vivi6g00415 490 Pfam Transferase family 22 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00415 Vivi-Chr6 10467639 10470726 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00415 32 484 Monolignol Biosynthesis Gene Families AT5G48930 25.161 9.12e-20 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00415 - - tpra:123889238 572.007