Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00414 ATGATGTCTCCCAACAAAAACAACATTAAAATCCACGAACACTTCAAAGTTGTTCCTCCATCATCCTCAACCCAAACAACAACAACAATCCCTCTCACTTACTTTGACATATTTTGGCTAAGGTTCCATCCAGTAGAACGTGTTTTCTTTTACACCCTCCCAAATTCACAATCACACCCCTCTTCTTTCTTCCAAAAGCTTGTTCCAATTCTCAAATCTTCACTTTCTTTAACCCTCCAACACTTTCCTCCTTTAGCCGGTAAAATCATTTGGCCTTCGGATTCTTCAAAACCATTCATCAAATTCAATCCCGACGAAGACGACGGAGTTTCATTACTAATTGCAGAATCTGATTTAAATTTCAACAATCTCGTTGAAAACTCACCACAAGAAGCTTCGTTATCTCGTTCGCTTATACCCTATCTAGAATCAACAGAATCTTTTGCTTCTGTTGTCTCAATTCAAATAACCCTTTTTCCAAATAATGGTTTTTCCATTGGTATCAGCACACACCATGCAGTTCTTGACGGAAAATCTTCAACCATGTTCATCAAAGCATGGGCTTATCTATGCAAAAAAATCATCGAAACCGAAGACGAATCACCAACTTTGTTACCAGATTTAGAGCCTCTATTCAACAGAGAAATCATCAAAGACCCGAATCAACTTGCTGCAAAATTCACAGAACACATGAATGAGATGGCAACAAAGATGTTCCCAAATGAAAAACCAAACCATCGAAACCTAAAGATATTACCTTTCGAACCTAAACTCGAAGACTCTCTTCGCGCTACGTTCAAGCTCACACGCGATGATCTGGATATAATCAAGCAAAGGGTGTTATCGAAATGGGAAATATTCGAAACAAATGCATCAAAGCCACAAACCCTATCCTCTTTTATTCTCACTTGTTGTTATTCACTAGTTTGCATTGCAAAAGCTATTCATGAAGTGGAAAAAGAGAAAGAGAAGTTTGGTTTTATTTTCTCAGTAGATTGTAGAGCAAGGTTAGAGCCACCAATACCAAGTAACTATTTTGGAAACTGTGTTTGGGGGATCATCATTGATTCACAACCGTTGGATTTTATAAAAGAAGATGGTGACTTTTTGGTTGCTAAGTGCATGCATGAGAGAATAAAGATGATAAATAAGAATATGTTTGGTAAATTTGGTCCTATGATGAATCAAGGGATTGAAGTGATTGCATTGGCGGGGTCTAATAGATTTGGTGTTTATGAGATTGATTTTGGTTGGGGGAGGCCGGAGAAGGTGGAGATAGTGTCGATTGATAGAGGTTTGACTATTGGTTTGGCAGAGAGTAGAGATGGGAATGGTGGAGTTGAAGTTGGAGTAGTTCTTAAGAAAGATGTGATGGATCACTTTAGGGATTTGTTTGTTGAAGGACTATGTAGGAGTTAG 1419 0.3827 MMSPNKNNIKIHEHFKVVPPSSSTQTTTTIPLTYFDIFWLRFHPVERVFFYTLPNSQSHPSSFFQKLVPILKSSLSLTLQHFPPLAGKIIWPSDSSKPFIKFNPDEDDGVSLLIAESDLNFNNLVENSPQEASLSRSLIPYLESTESFASVVSIQITLFPNNGFSIGISTHHAVLDGKSSTMFIKAWAYLCKKIIETEDESPTLLPDLEPLFNREIIKDPNQLAAKFTEHMNEMATKMFPNEKPNHRNLKILPFEPKLEDSLRATFKLTRDDLDIIKQRVLSKWEIFETNASKPQTLSSFILTCCYSLVCIAKAIHEVEKEKEKFGFIFSVDCRARLEPPIPSNYFGNCVWGIIIDSQPLDFIKEDGDFLVAKCMHERIKMINKNMFGKFGPMMNQGIEVIALAGSNRFGVYEIDFGWGRPEKVEIVSIDRGLTIGLAESRDGNGGVEVGVVLKKDVMDHFRDLFVEGLCRS 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00414 472 PANTHER - 9 469 - -
Vivi6g00414 472 Gene3D - 9 242 IPR023213 -
Vivi6g00414 472 Gene3D - 258 470 IPR023213 -
Vivi6g00414 472 Pfam Transferase family 16 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00414 Vivi-Chr6 10459015 10460641 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00414 21 467 Monolignol Biosynthesis Gene Families AT5G48930 24.059 7.37e-19 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00414 - - tpra:123889238 679.093