Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00413 ATGCCACTAAAATCACACCGTTCTCTTCTCAATTCTTTTTGTATATATAACAAAAGAAAACACAAACACCATAGATTCATTTGGAAAAGAATGGCATCATCAATCAATGGAAGAAAACCAAGTGAAATTTTCAAAGCACAAACTCTCTTATACAAACACATATATGCTTTCATAGATTCCATGTCTCTTAAATGGACAGTTGAAATGAACATACCAAATATTATCCATGATCATGGCCAACCAATTACTCTATCAAACCTAGTTTCAGTTCTTCAAGTTCCATCATCCAAAGCCGGTAACGTGAAGCGTCTCATGCGTTACCTTTCACACAATGGACTCTTCGAGATTGTAACGAATCCAGAGTTGGAAAACGAAGAAGAAGCTTATGCTCTAACTGTTGCTTCAGAGCTTCTTGTTAAAGGAAGTGACATTTGTTTAGCTCCAATGGTTGAGTGTATTCTTGATCCAACGCTTTCGAGTTCGTATCATGAACTGAAAATATGGATTTATGAGGAAGATCTTACACTCTTTGATGTTACTTTAGGATCTGGTTTTTGGGATTTTCTTGATAAAAACCCTGATTATAATAGATCGTTTAACGAGGCAATGGCTAGTGATTCGAAAATGATAAACATGGTTTTGAGAGATTGTAATTTTGTGTTTGAAGGATTGGAATCAATTGTAGATGTTGGTGGTGGAACTGGAACAACAACTAAGATTATTTGTGAGACATTTCCTATGTTGAAATGTATTGTTTTTGATAGGCCAAAGGTTGTTGAGAATTTATCTGACGCCAAGAATTTGAGTTATGTTGCTGGTGACATGTTCATATCTATTCCTAATGCTGATGCTGTTCTTCTTAAGTGGATTTTACATAATTGGAGTGATAAGGATTGCGTAAAGATGTTGAAAATATGTAAAGAAGCTGTTACAAGTGATGGAAAAAGAGGAAAACTGATTGTGATAGATATGGTGATAAATGAAAAGAATGATGAGAAGAACCTTACTCAAATGAAGCTCCTTATGGATGTTAACATGGCATGTGTTTTTAATGGGAAAGAGAGAAATGAAGAAGAATGGAAGAAACTCTTCATAGAAGCTGGCTTTCGAAACTATAAGATATCTCCTTTAACTGAATTTTTATCTCTTATTGAAATCTATCCTTAA 1167 0.3436 MPLKSHRSLLNSFCIYNKRKHKHHRFIWKRMASSINGRKPSEIFKAQTLLYKHIYAFIDSMSLKWTVEMNIPNIIHDHGQPITLSNLVSVLQVPSSKAGNVKRLMRYLSHNGLFEIVTNPELENEEEAYALTVASELLVKGSDICLAPMVECILDPTLSSSYHELKIWIYEEDLTLFDVTLGSGFWDFLDKNPDYNRSFNEAMASDSKMINMVLRDCNFVFEGLESIVDVGGGTGTTTKIICETFPMLKCIVFDRPKVVENLSDAKNLSYVAGDMFISIPNADAVLLKWILHNWSDKDCVKMLKICKEAVTSDGKRGKLIVIDMVINEKNDEKNLTQMKLLMDVNMACVFNGKERNEEEWKKLFIEAGFRNYKISPLTEFLSLIEIYP 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00413 388 FunFam O-methyltransferase ZRP4 140 388 - -
Vivi6g00413 388 Gene3D - 31 138 IPR036388 -
Vivi6g00413 388 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 51 388 IPR016461 GO:0008168
Vivi6g00413 388 FunFam Coniferyl alcohol 9-O-methyltransferase 33 138 - -
Vivi6g00413 388 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 144 386 IPR029063 -
Vivi6g00413 388 Gene3D Vaccinia Virus protein VP39 139 388 IPR029063 -
Vivi6g00413 388 Pfam O-methyltransferase domain 162 370 IPR001077 GO:0008171
Vivi6g00413 388 PANTHER O-METHYLTRANSFERASE 44 373 IPR016461 GO:0008168
Vivi6g00413 388 SUPERFAMILY "Winged helix" DNA-binding domain 40 142 IPR036390 -
Vivi6g00413 388 PIRSF O-mtase 28 388 IPR016461 GO:0008168
Vivi6g00413 388 Pfam Dimerisation domain 61 109 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00413 Vivi-Chr6 10452654 10454788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00413 56 386 Monolignol Biosynthesis Gene Families AT5G54160 31.548 1.63e-47 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00413 K22588 - ag:AAC49926 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g00413 6 10452654 10454788 Vivi6g00413 6 10452654 10454788 ECH