Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00410 ATGGATTCCAACAACCTTAAAATCCATGAACACATTAAGGTTGTTCCTCCATCATCATCAACCCAAACAACAACAATAATCCCACTCACTTTCTTTGACATATTTTGGCTAAAGTTCCATCCAGTAGAACGTGTGTTCTTCTACACCCTCCCAAATTCACAATCACACCCCTCTTTCTTCTTTCAAGAAATTGTTCCAATTCTCAAATCTTCACTCTCTTTAACCCTCAAACACTTTCTCCCTTTAGCCGGTAAAATTGTTTGGCCTTCTGATTCTTCAAAACCATTCCTCCAATTCAATCCCAACGACGATGACGGAGTTTCATTACTCATTGCAGAATCTGATTTAGATTTCAACCATGTCATTGAAAATTCACCACATGAAGCTTCATTGTCGCGTTCTTTAATACCGCTTTTAGAATCAACCGATTCTTTTGCCTCCATTATCTCAATCCAAATAACTCTTTTTCCGAAAAGTGGTTTTTCCATTGGTATAAGCACACACCATGCAGTTCTTGATGGAAAATCTTCAACCATGTTCATAAAAGCGTGGGCTTATCTATGCAACAAAACCATTGAAACCCTAGAAGACTCACCAACATTGTTACCAAAGTTCGAGCCTTTATTCAACAGGGAAATCATCCAAGATCCAAATGATCTTGCTGCTGACTTCACAAATATCTGGATTGATATCATGAAACAGAAGCTTCCAAATGAAAAAGTAAACAACTTGGAGATTTTCCCATTTGAACCAAAACTCAAAGACTATGTCCGTGCAACGTTCAAGCTCACGCATGGAGATTTGGATAAAATAAAGCAAAGGGTGTTATCCAAATGGGAAATACTCTATCCAAACGAATCAAAGCCGCAAAGTTTATCGACTTTTGTTATCGCTTGTGCTTATTCGCATGTTACTATTGCAAAAGCTATGAATGGAGTTGATAAGGAGAAAGAGAAGTTTTCTTTTGTTTTCTCGGTAGATTGTAGAGCAAGGTTAGAACCACCAATACCAAATAACTATTTTGGTAACTGTGTTTGGGCGCAATTCCCGGATACACAAGCATTGGATTTTATCAAAGAAGACGGAGTTCTTTTAGTTGCTAAATGTATTCATGAAAAAATATTGATGATAGGTGAAAAGGGTGTTCTTGAAGGAGCTAAAGATTGCATTAATAAATTTATTTCTTTGGGAAGAGAAGGATTTGAAGTTATGGGAGTGGCGGGGTCTAATAGATTTGGTGTTTATGAGACTGATTTCGGTTGGGGAAGGCCGGAAAAGGTGGAGATAGTGTCGATCGATAGAGGTTTAACAATTGGTTTGGCAGAGAGCAAAGATGGCAATGGTGGAGTTGAAGTTGGAGTAGTTCTTAATAAAGATGTAATGGATCTCTTTAGAAATTTGTTTCTTGAAGGACTTAGAATTGATTGA 1428 0.3754 MDSNNLKIHEHIKVVPPSSSTQTTTIIPLTFFDIFWLKFHPVERVFFYTLPNSQSHPSFFFQEIVPILKSSLSLTLKHFLPLAGKIVWPSDSSKPFLQFNPNDDDGVSLLIAESDLDFNHVIENSPHEASLSRSLIPLLESTDSFASIISIQITLFPKSGFSIGISTHHAVLDGKSSTMFIKAWAYLCNKTIETLEDSPTLLPKFEPLFNREIIQDPNDLAADFTNIWIDIMKQKLPNEKVNNLEIFPFEPKLKDYVRATFKLTHGDLDKIKQRVLSKWEILYPNESKPQSLSTFVIACAYSHVTIAKAMNGVDKEKEKFSFVFSVDCRARLEPPIPNNYFGNCVWAQFPDTQALDFIKEDGVLLVAKCIHEKILMIGEKGVLEGAKDCINKFISLGREGFEVMGVAGSNRFGVYETDFGWGRPEKVEIVSIDRGLTIGLAESKDGNGGVEVGVVLNKDVMDLFRNLFLEGLRID 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00410 475 PANTHER - 6 473 - -
Vivi6g00410 475 FunFam Phenolic glucoside malonyltransferase 1 6 237 - -
Vivi6g00410 475 Gene3D - 252 474 IPR023213 -
Vivi6g00410 475 Pfam Transferase family 13 466 - -
Vivi6g00410 475 FunFam Phenolic glucoside malonyltransferase 1 253 474 - -
Vivi6g00410 475 Gene3D - 6 240 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00410 Vivi-Chr6 10398641 10400068 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00410 33 470 Monolignol Biosynthesis Gene Families AT5G48930 24.276 3.79e-19 87.8