Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00370 ATGTCGTATGTTGGTGAATTGAGAAGAAGACACTCTTCTGCAAAAACAAGTACTGAAAACAATGAAGAAAAAGCTGCTCCTCGTTATCTTCAAGCTTCGACCGGATCCTGTCACGATTTCTGCAAATATGGGAAACAACTCGCACTTGAACCAAAGAAAATGAGTTTAATGCCTAGAATTGCTGAAAGGACACACCTCCGCCGGAGTTCAGTAGGTGACGTAGTAGCAGCAGTGACCCCAAGTGTCAAACGTAGAGCATCAGTTGATTTCGGACCAACAAGGATGTCATTGGCCAAACGCAGAGAATCAACTGATTCTAATGCCTCTGACGCAATCAAGGTAATCAAAACCGAACCAGGCCGACCAGTCCACCCTGACAATGGAGTTGTCGTGGTGAACAAAACGAAAACATCATCTGTCAAAGTGAAACAATCACCACTTCTTCCGAAATCACATTTCTCCTCTACCTGCAAAACTAGGAGGCAGGAAATTTCATCAAGTTCTAAGATGGACATTACCCCAAAACCAATTTCCAAGAAGGCTGAAGCTTCATCAATGTCATCTTCTAAGAAGGAGGAACCTCTATCGAAATCAATCTTTCATAACGTGAAAATCCATCCGATATCAACTTATTCGGCCAAAACTCCATTGAAATCAACTTTCAAGAAGACGGGCCAAATAGCTTCACCTTTGTTGCCTATTTCCTCGCCCAAACCTTCGCGCAAAAGAGTTGTGGGTATTAATATGCACAAGAGCCTGAAAACTGTGTCGCGTGTTAAGAATCAACCAAAGCCTAGAAAAATTGAACCTGAGGTACACTGCATTGAGGCTGAGGCAGAAGAAAAGACTCTGTATGTCATCGAGATAGAAAACGAAGACAATACTTTTCAATCCGATCAAAATGCAAACCAGGAAATTGAACTTTCCCGGTCTCAATCATTTTCATCATCCAAGTTTTCATCACAAGAAGATCAAGAGGAATCTGAATATGCAGCTAGTGAATTCGAGGAGGATTCTTGTTTCGAATTTGCAAACAACGAAAAGGAAAACAAGGAAAGTCTGGAGACATTGGACTTGAAAGTTGAGAATGAGAAACCGCGAAAGGACGAGATTGTGATTTTGGTTGAACCTCAAATTGAGGAAAGTGGTACCAAGAAGCTTAAGTTCAAAAGAGGTAAAGTGTTGAGAGAAAACGATGCAGATTCTGATGAGGGGGAAGACGAGACCAGTTGCGAGAAAGTTGTTTTGAGACATCAAGATGTGAAAGGGAAGAAAGATGAACAAGGATTGTTGAATAATGTGATTGAGGAAACAGCAAGTAAACTGGTTGAGATTCAAAGAAGTAAGGTGAAAGCTTTGGTTGGTGCATTTGAGACTTTAATCTCTCTCAATGAGAAAAAAACCTTGAGCATGCACTAG 1419 0.4116 MSYVGELRRRHSSAKTSTENNEEKAAPRYLQASTGSCHDFCKYGKQLALEPKKMSLMPRIAERTHLRRSSVGDVVAAVTPSVKRRASVDFGPTRMSLAKRRESTDSNASDAIKVIKTEPGRPVHPDNGVVVVNKTKTSSVKVKQSPLLPKSHFSSTCKTRRQEISSSSKMDITPKPISKKAEASSMSSSKKEEPLSKSIFHNVKIHPISTYSAKTPLKSTFKKTGQIASPLLPISSPKPSRKRVVGINMHKSLKTVSRVKNQPKPRKIEPEVHCIEAEAEEKTLYVIEIENEDNTFQSDQNANQEIELSRSQSFSSSKFSSQEDQEESEYAASEFEEDSCFEFANNEKENKESLETLDLKVENEKPRKDEIVILVEPQIEESGTKKLKFKRGKVLRENDADSDEGEDETSCEKVVLRHQDVKGKKDEQGLLNNVIEETASKLVEIQRSKVKALVGAFETLISLNEKKTLSMH 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00370 472 SMART CaM_binding_2 345 462 IPR012417 GO:0005516
Vivi6g00370 472 MobiDBLite consensus disorder prediction 307 337 - -
Vivi6g00370 472 MobiDBLite consensus disorder prediction 307 321 - -
Vivi6g00370 472 MobiDBLite consensus disorder prediction 1 29 - -
Vivi6g00370 472 MobiDBLite consensus disorder prediction 8 22 - -
Vivi6g00370 472 MobiDBLite consensus disorder prediction 140 173 - -
Vivi6g00370 472 PANTHER EMB|CAB62594.1 8 468 - -
Vivi6g00370 472 MobiDBLite consensus disorder prediction 140 195 - -
Vivi6g00370 472 Pfam Plant calmodulin-binding domain 355 462 IPR012417 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00370 Vivi-Chr6 9260532 9262198 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g00684 4 15029344 15032167 Vivi6g00370 6 9260532 9262198 PCT