Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00297 ATGGCTGCAACTTTGGCTGCAAATGTGCCTTTACTAGGTGATGCCATAACTGATGAGGAGAAAGTTATAGCCTCAGATTCTTCAAGCAAAAATGAAGTATCTTTTTTTCGTTCATGTCTTAATTTACTCAATGCAGTTGCAGGTATTGGAATACTATCAATTCCATATGCTTTAGCTTCAGGAGGGTGGCTAAGTTTACCATTTTTATTTTCTATTGCTGCAATAGCATTTTACACTGGTTTATTAATGAAAAGATGTATGGAAAAACATTCCAACATAAGAACATTTCCTGATATGGGTGAACTTGCATTTGGAAAAACCGGAAAATTAATAGTAGCAATATCAATGTATACTGAGCACTATTTACTTACAATAGGTTTCTTGATACTTGAAGGAGACAATTTGAGTCACTTATTTCCCATTGAAGAGTTTCAAGTGGCTGGTATATCAATTGATGCAAAGCAATTCTTTGTGATATTGGTTGCCCTAATTGTTTTGCCAACGATTTGTTTGGATAATCTGAGTTTGATTTCTTATGTATCTGCTAGTGGTATTTTTGCTACTACAATTATCATTTTGTCAATATCATGGTCTGCAACATTTGATGGAGTTGGTGTTAAACAAAAGGGTGATTTAGTCAATTGGAATGGTATTTCTACCGCGGTTAGCCTGTATACCGTTTGCTATAGTGCACATCCTGTTTTTCCAATTATCTACAATTCCATGAAGAAGAAACATCAATTCTCTTATGTCCTAATTGTATGCTTTATGTTAGCAACGACTGCTTTTGCATTATTCGCTATAATTGGTTACATAATGTTTGGTTCAAAAGTTGAATCACAAGTAACATTAAATTTACCACTGGACAAATTAAGTTCAAGAATAGCAATTTACACAACTTTGGTGACTCCAATAACTAAGTTTGCTATAGTTGCAATGCCAATTACAGATGCTTTAAAAAAATTACTTCCAAAGAAATTCAAGAATAATAGAATGACCAACATCTTTTTGAGTACTGTTCTTCTAACTAGTAGTGTTTTTGTCACATTGGCTCTTCCATTTTTTGGATCTCTCATGTCATTGGTTGGTGCATTTCTAACAGTCACGGCTTCTATTCTCCTTCCTTGCTTGTGTTACTTGAAGATTTCAGGCATTTACAGGAAATTTGAGTTTGAGACAATTGTAATAGTAGTAATAATATTAGTAGCTATAGTAATGGGAATATCTGGAACATACACTTCAGTTGTTGAACTAGTACAAGAATCTTCTAACAAATAG 1278 0.3357 MAATLAANVPLLGDAITDEEKVIASDSSSKNEVSFFRSCLNLLNAVAGIGILSIPYALASGGWLSLPFLFSIAAIAFYTGLLMKRCMEKHSNIRTFPDMGELAFGKTGKLIVAISMYTEHYLLTIGFLILEGDNLSHLFPIEEFQVAGISIDAKQFFVILVALIVLPTICLDNLSLISYVSASGIFATTIIILSISWSATFDGVGVKQKGDLVNWNGISTAVSLYTVCYSAHPVFPIIYNSMKKKHQFSYVLIVCFMLATTAFALFAIIGYIMFGSKVESQVTLNLPLDKLSSRIAIYTTLVTPITKFAIVAMPITDALKKLLPKKFKNNRMTNIFLSTVLLTSSVFVTLALPFFGSLMSLVGAFLTVTASILLPCLCYLKISGIYRKFEFETIVIVVIILVAIVMGISGTYTSVVELVQESSNK 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00297 425 Pfam Transmembrane amino acid transporter protein 33 412 IPR013057 -
Vivi6g00297 425 PANTHER OS05G0424000 PROTEIN-RELATED 39 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00297 Vivi-Chr6 7499279 7500804 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00297 16 419 Amino Acid or Auxin Permease AAAP Family AT3G28960 49.505 5.06e-148 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00297 K15015 - gmx:100794374 551.977