Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00296 ATGGCTGCAACTTCAGTCCAAACCACCTTAACTTATCCTTTACTTCTAGCTGATGAGGAGAAACTCACAGCCTCTCATCCTCCAAACAAAAATGAAGTATCTTTCTTTCGAACATGTCTCAATGGACTCAATGCAATTGCAGGTGTTGGAATACTTTCAGTTCCATATGCTTTAGCCTCCGGAGGGTGGCTAAGTTTAGCACTTTTGTTTTTAATAGCCGGAGTAACATTTTACTCCGGTATATTAATGAAAAGATGCATGGAAATAAATTCAAACATTAAAACATATCCTGATATAGGCGAACTTGCTTTCGGAAAAACAGGAAGGTTAATAGTATCGATATCGATGTACACTGAGATCTACTTGCTTTCAATAGGTTTCTTGATTTTAGAAGGAGACAATTTGAGTAATTTATTTCCTATTGAAGATTTTCATGTGGCTGGTATATCAATTGGTGCAAAGCAATTTTTTGTGATATTGGTTGCACTAATTATTTTGCCAACTGTTTGGTTGGATAATTTGAAGTTGCTTTCTTATGTATCTGCAAGTGGTGTCTTTGCTTCTGCTATTATTATACTGTCCATAGCATGGACTGCAGCATTTGATGGAGTTGGTGTTCATCAAAAGGGTGATTTGGTAAATTGGAATGGGATTGCAACTGCTGTTAGCTTGTATGCTTTTTGCTATAGTGCACATCCTATTTTTCCTGTTCTCTATACTTCCATGAAGAACAAACATCAATTCTCTCAAGTTCTTATTGTCTGCTTTATGTTAACAACTGCCGGTTATGCATCAATGGCTATAATTGGTTACTTAATGTTTGGTTCAAAAGTTGAATCACAAGTAACATTAAACCTTCCTTTAAACAAAATAAGTTCAAAAATAGCAATATACACAACCTTGGTAAACCCAATATCGAAATTTGCTTTGATGGCAATACCAATTACAAATGCTTTGAAAGAGTTACTTCCAACGACATACAAGAATAATCGAATGACTAACATCTTTATGAGTACTGCTCTTGTAATTAGCATTGTTGTCATTACATTGACTCTTCCATTTTTTGGATCCCTCATGTCATTGGTTGGAGCATTTTTAACTGTCACAGCTTCTATTTTGCTTCCTTGTTTGTGTTTCTTGAAGATTTCAGACACTTACATGAAGTTTGGGCTTGAAACAATTACAATAATGGTAATAATATTTGTAGGTTTAGTAATGGGAATTTCAGGGACTTACACTTCAATTGTTGAACTAATACAAAATTTGTAA 1269 0.3459 MAATSVQTTLTYPLLLADEEKLTASHPPNKNEVSFFRTCLNGLNAIAGVGILSVPYALASGGWLSLALLFLIAGVTFYSGILMKRCMEINSNIKTYPDIGELAFGKTGRLIVSISMYTEIYLLSIGFLILEGDNLSNLFPIEDFHVAGISIGAKQFFVILVALIILPTVWLDNLKLLSYVSASGVFASAIIILSIAWTAAFDGVGVHQKGDLVNWNGIATAVSLYAFCYSAHPIFPVLYTSMKNKHQFSQVLIVCFMLTTAGYASMAIIGYLMFGSKVESQVTLNLPLNKISSKIAIYTTLVNPISKFALMAIPITNALKELLPTTYKNNRMTNIFMSTALVISIVVITLTLPFFGSLMSLVGAFLTVTASILLPCLCFLKISDTYMKFGLETITIMVIIFVGLVMGISGTYTSIVELIQNL 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00296 422 PANTHER OS05G0424000 PROTEIN-RELATED 43 403 - -
Vivi6g00296 422 Pfam Transmembrane amino acid transporter protein 34 415 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00296 Vivi-Chr6 7469102 7471898 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00296 19 419 Amino Acid or Auxin Permease AAAP Family AT3G28960 55.860 2.80e-163 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00296 K15015 - gmx:100794374 613.994