Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00295 ATGTCACTGAAAGAAAATCCACTGATCTCAAAGATGGCGGTAACTTCTGTCCAAACCAACTTAAATTTTCCTTTACTATATGAGGGGAGTCTAGTTGATGAGGAGAAATTCATATCCTCTGATGCTCCAAATAAAAATGAAGTATCTTTTATTCGAACATGTCTCAATGGACTCAATGCAATTGCAGGTGTTGGAATACTATCAGTTCCATATGCTTTAGTCTCTGGAGGGTGGCTAAGTTTAGCACTTTTATTTTCTATTGCTTCAGTCGCATTTTATACTGGTGTATTAATGAAAAGATGTATGGAAAAACATTCCAACATAAGAACATTTCCTGATATGGGTGAACTTGCATTTGGAAAAACTGGAAAAATAATAGCATCAGCATCAATGTATACTGAGCTCTACTTGCTTGAAATAGGTTTCTTAATTTTAGAAGGAGACAATTTGAGTAACTTATTTCCTATTGAAGAGTTTCAAGTGGCTGGAATATCAATTGGTGCAAAGCAACTCTTTGTGATATTGGTTGCACTAATTATTTTGCCAACAATTTGCTTGGATAATCTGAGTTTGATTTCTTATGTATCTGCAAGTGGTGTCTTTGCTTCTGCAATTATCTTTTTATCAATATCATGGATTGCAGTTTTTGATGGAGATATTGTTCAACAAAAGGGTGATTTAGTAAATTGGAATGGCATTCCTACAGCTGTTAGCTTGTATTCTTTTTGCTATAGTGCACACCCCGTTTTTCCAATTCTCTACACTTCCATGAAGAACAAACGTCAATTTTCGTATGTCCTAATTGTATGCTTTATGTTAGCAACGTCTGTTTTTGCATCGATCGCTATAGTTGGTTATTTAATGTTTGGTTCAAAAGTTGAATCACAAGTAACATTAAACTTACCACTAGATAAATTAAGTTCAAGAATTGCAATATACACAACCTTGCTAAGTCCAATATCTAAGTTTGCTTTGGTTGCAATGCCAATTACAAATGCTTTAAAAGAGTTCCTTCCAAGGACATACAAGAATAATAAAATCACCCACATCTTTTTGAGTATTGTACTTCTAAGTAGTATTGTTATTGTGACATTGACTCTTCCATTTTTTGGAACTCTCATGGCATTGGTTGGAGCATTTCTTACTGTCACAGCTTCTTTTCTGCTTCCTTGCTTGTGTTACTTGAAGATTTCAGGAAGTTATAGGAAATGTGAATTTGAGACAGTGATGATAGTAGTAATAATATTTGTAGCAATAGTTATGGGAATTTCCGGGACATACACTTCAGTTGTTGAACTAGTACAAAAGTCTTCTAACAAATAG 1323 0.3416 MSLKENPLISKMAVTSVQTNLNFPLLYEGSLVDEEKFISSDAPNKNEVSFIRTCLNGLNAIAGVGILSVPYALVSGGWLSLALLFSIASVAFYTGVLMKRCMEKHSNIRTFPDMGELAFGKTGKIIASASMYTELYLLEIGFLILEGDNLSNLFPIEEFQVAGISIGAKQLFVILVALIILPTICLDNLSLISYVSASGVFASAIIFLSISWIAVFDGDIVQQKGDLVNWNGIPTAVSLYSFCYSAHPVFPILYTSMKNKRQFSYVLIVCFMLATSVFASIAIVGYLMFGSKVESQVTLNLPLDKLSSRIAIYTTLLSPISKFALVAMPITNALKEFLPRTYKNNKITHIFLSIVLLSSIVIVTLTLPFFGTLMALVGAFLTVTASFLLPCLCYLKISGSYRKCEFETVMIVVIIFVAIVMGISGTYTSVVELVQKSSNK 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00295 440 PANTHER OS05G0424000 PROTEIN-RELATED 58 419 - -
Vivi6g00295 440 Pfam Transmembrane amino acid transporter protein 49 427 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00295 Vivi-Chr6 7434905 7438237 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00295 33 434 Amino Acid or Auxin Permease AAAP Family AT3G28960 51.244 1.85e-149 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00295 K15015 - gmx:100794374 571.237