Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00292 ATGGAAGGTGAAGGTGGTGCTTGGAAGCAGTGTGATGAGGATATAACTCTGAATAATCCTCTACTATCAGAACATGAAGGAAACCAAATTTCTGGTAGTGGTCTCCCCAACAATGTCATTACCACAACATCTTTCCTTAAAACTTGTTTCAATGGCCTCAATGCTTTAACAGGCATTGGAATACTATCAGTTCCATATGCTTTAGCCTCAGGCGGGTGGCTAAGTTTAGCACTTTTATTTTCTATTGCAACAATAGCATTCTACACAGGTTTATTAATGAAAAGATGTATGGAAAAACATTCCAACATTAAAATATTTCCTGATATAGGTGAACTTGCATTTGGAAAAACCGGAAGATACATAGTATCAATATCGATGTATACAGAACTATACTTGGTTTCAACTGGGTTCTTGATTCTAGAAGGAGATAATTTGAGTAACTTATTTCCTATTGGAGAGTTTCAAGTGGTTGGTTTATCAATTTGTGCAAAGCAATTCTTTGTGGTATTGGTTGCATTAATTATTTTGCCAACAATTTGGTTGGATAATTTGAGTTTGCTTTCATATGTTTCTGCTAGTGGTGTTTTTGCTTCAGTTATAATTATTTTGTCAATATCTTGGACTGCAACATTTGATGGAATTGGCTTTCACCAAAAGGGTGATATTGTGAATTGGAATGGGATTCCAACAACTGTAAGCTTGTATGCTTTTTGTTATTGTGCACATCCGATTTTTCCTACTCTCTACAATTCCATGAGCAACAAACATCAATTCTCCATTGTCCTAATTGTTTGCTTTGTATTAACCACCATTGGTTATGCATCAATGGCTATAATTGGTTATTTAATGTTTGGTTCAAAAGTTGAATCACAAGTAACATTAAATTTGCCACTAAACAAAATAAGTTCAAAAATTGCAATATACACGACTTTGGTGAATCCAATATCAAAGTTTGCTTTGATGGCAACACCAATTATAAATGCTTTGAAAGATTTACTTCCAAGGACATACAAGAATATTAGAGTGACCAACATCTTTGTGAGCACTGTCTTTATAATTAGTAATGTTATTGTTGCATTGAGTGTTCCATTCTTTGGATCTCTTATGTCATTGGTTGGAGCATTTCTAAGTGTTACTGCTTCTGTTCTGCTTCCTTGTTTGTGTTACTTGAAGATTTTTGGTACTTATAGGAAATTTGGGTTTGAGACAATGACTATAGTGATGATAGTATTAGTAGCTATAGTAATGGAAATATCTGGGACATATATTTCAATTGTTGAAATAGTACAAAATTTGTAA 1299 0.3364 MEGEGGAWKQCDEDITLNNPLLSEHEGNQISGSGLPNNVITTTSFLKTCFNGLNALTGIGILSVPYALASGGWLSLALLFSIATIAFYTGLLMKRCMEKHSNIKIFPDIGELAFGKTGRYIVSISMYTELYLVSTGFLILEGDNLSNLFPIGEFQVVGLSICAKQFFVVLVALIILPTIWLDNLSLLSYVSASGVFASVIIILSISWTATFDGIGFHQKGDIVNWNGIPTTVSLYAFCYCAHPIFPTLYNSMSNKHQFSIVLIVCFVLTTIGYASMAIIGYLMFGSKVESQVTLNLPLNKISSKIAIYTTLVNPISKFALMATPIINALKDLLPRTYKNIRVTNIFVSTVFIISNVIVALSVPFFGSLMSLVGAFLSVTASVLLPCLCYLKIFGTYRKFGFETMTIVMIVLVAIVMEISGTYISIVEIVQNL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00292 432 PANTHER OS05G0424000 PROTEIN-RELATED 52 414 - -
Vivi6g00292 432 Pfam Transmembrane amino acid transporter protein 42 421 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00292 Vivi-Chr6 7321965 7331669 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00292 25 429 Amino Acid or Auxin Permease AAAP Family AT3G28960 58.765 8.56e-174 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00292 K15015 - gmx:100786627 628.632