Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00289 ATGGAAGGAGAAAGTGATAAGTGGCAGAAATGTGATGAAGATGCAACTCTGAATATTCCTTTGGTAGTAGAACATGAAGAAAGACAAATTTCTGGTTGCGGTCCCAACAACAATATTGTCACCACATCTTTCCTTAAAACTTGTTTCAATGGCCTCAATGCTTTATCAGGTGTTGGAATACTATCAGTTCCATATGCATTAGCCTCAGGAGGGTGGTTAAGTTTAGCACTTTTATTTTCTATTGCAGCAGTAGCATTTTACTCCGGCTTATTAATGAAACGATGCATGGAAAAAAATCCGAATATTAGAACATATCCGGATATAGGTGAACTCGCATTTGGAAAAACCGGAAGATTAATAGTATCAATATCAATGTATGTGGAACTATACTTGGTTTCTACAGGGTTCTTGATTCTAGAAGGAGATAATTTGAGTAACTTATTGCCAATTGAAGAGTTTCAAGTGGTTGGCTTATCGATCGGTGCAAAGCAGTTCTTCGTGATATTGGTTGCTCTAATTATTTTGCCAACGGTTTGGTTGGATAATTTGAGTTTGATTTCTTATGTATCTGCAAGTGGTGTCTTCGCTTCTGCTATTATTATATTGTCAATATCATGGACTGCAACATTTGATGGAGTTGGTTTTTATCAAAAGGGTGATATTGTTAATTGGAATGGAATCCCTACTGCTGTTAGCTTGTATGCATTTTGCTATTGTGCACATCCAGTTTTTCCTACTCTCTACAATTCCATGAGGAACAAACATCAGTTCTCAAATGTCCTAATTGTATGTTTTATATTAACTACAGCTGGTTATGCATCAATGGCTATAATTGGTTACTTAATGTTTGGTTCAAAAGTTGAATCACAAGTAACATTAAACTTACCACTTAACAAGTTAAGTTCAAAAATTGCAATATACACAATATTGGTGAATCCAATAGCAAAGTTTGCTTTGATGGCAACACCAATTACAAATGCTTTGAAAGATTTATTTCCAAGGTCATACAAGAACAATAGAGTGACCAACATCTTTGTGAGCACTATCCTTGTAATTAGTAATGTCATTGTTGCATTGAGTGTTCCATTCTTTGGGTCTCTTATGTCATTGGTTGGAGCATTTCTAAGTGTCACTGCTTCCATTTTGCTTCCTTGTTTGTGTTACCTGAAGATTTCTGACACTTATAGGAAATTTGGGTTTGAGGCTATGATGATAGTGATAATAGTATTAGTAGCTATGGTAATGGGAATATTCGGAACATATACTTCAATTGTTGAAATAGTACAAAATTTGTAA 1296 0.3495 MEGESDKWQKCDEDATLNIPLVVEHEERQISGCGPNNNIVTTSFLKTCFNGLNALSGVGILSVPYALASGGWLSLALLFSIAAVAFYSGLLMKRCMEKNPNIRTYPDIGELAFGKTGRLIVSISMYVELYLVSTGFLILEGDNLSNLLPIEEFQVVGLSIGAKQFFVILVALIILPTVWLDNLSLISYVSASGVFASAIIILSISWTATFDGVGFYQKGDIVNWNGIPTAVSLYAFCYCAHPVFPTLYNSMRNKHQFSNVLIVCFILTTAGYASMAIIGYLMFGSKVESQVTLNLPLNKLSSKIAIYTILVNPIAKFALMATPITNALKDLFPRSYKNNRVTNIFVSTILVISNVIVALSVPFFGSLMSLVGAFLSVTASILLPCLCYLKISDTYRKFGFEAMMIVIIVLVAMVMGIFGTYTSIVEIVQNL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00289 431 Pfam Transmembrane amino acid transporter protein 41 421 IPR013057 -
Vivi6g00289 431 PANTHER OS05G0424000 PROTEIN-RELATED 50 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00289 Vivi-Chr6 7240621 7246269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00289 23 428 Amino Acid or Auxin Permease AAAP Family AT3G28960 57.882 1.80e-175 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00289 K15015 - gmx:100794374 642.114