Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00287 ATGGAGGGAATTGAAAGAACATCATCAACATACAATTCATTCACTCTAACAAATGAGATGCAAAATCATACAACACAAAAGCAATCAATGTACCCTCCTGGCTTTCCAAGAAAGGTATTTGCAGAGGTTATAGGGACATATTTGTTGGTGTTTGTTGGAAGTGGGACAGCTGCCATGAGTGCAATAGATGAAAACAATGTATCAAAATTGGGAGCTTCACTTGCAGGTGGATTCATTGTTACTGTTATGATTTATGCAATTGGACATATATCTGGTGCACACATGAATCCGGCTGTTTCCTTAGCTTTTGCCACCATTTCCCATTTTCCTTGGAAACAGGTTCCATTTTACATTGCAGCTCAACTCACAGGAGCAATTTCTGCTTCATACACACTTAGAGCATTGTTAGAGCCATCAAAGCAGCTAGGTGCAACATCACCTTCTGGATCAAACATTCAAGCATTAATCATAGAAATCGTCACCACTTTCACCATGGTCTTCATCTCCACCGCCGTCTCCACCGATTCAAAAGCGATTGGAGAACTTGCTGGTGTAGCAGTAGGTTCATCTGTTTGCATAGCAAGCATTGTTGCTGGACCAATATCAGGGGGATCAATGAACCCAGCAAGGACATTAGGTCCTGCATTTGCTTCTGCATCCTACAAGGGAATTTGGGTCTATATAGTTGGTCCAATTACTGGTGCACTTTTAGGTGCATGGTCTTATGTTGTTATTCAAGAGACAAATCAGAAAAAAGATATTGCAACTTTACAATCTCCTCTTTCACTTAAGCAACAACATGAGATGAATGGGATTGAGTTATAG 825 0.4061 MEGIERTSSTYNSFTLTNEMQNHTTQKQSMYPPGFPRKVFAEVIGTYLLVFVGSGTAAMSAIDENNVSKLGASLAGGFIVTVMIYAIGHISGAHMNPAVSLAFATISHFPWKQVPFYIAAQLTGAISASYTLRALLEPSKQLGATSPSGSNIQALIIEIVTTFTMVFISTAVSTDSKAIGELAGVAVGSSVCIASIVAGPISGGSMNPARTLGPAFASASYKGIWVYIVGPITGALLGAWSYVVIQETNQKKDIATLQSPLSLKQQHEMNGIEL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00287 274 CDD MIP 37 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi6g00287 274 SUPERFAMILY Aquaporin-like 29 249 IPR023271 -
Vivi6g00287 274 PANTHER AQUAPORIN NIP2-1 21 251 IPR034294 -
Vivi6g00287 274 Pfam Major intrinsic protein 35 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi6g00287 274 PRINTS Major intrinsic protein family signature 225 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi6g00287 274 PRINTS Major intrinsic protein family signature 113 132 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi6g00287 274 PRINTS Major intrinsic protein family signature 188 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi6g00287 274 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi6g00287 274 PRINTS Major intrinsic protein family signature 76 100 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi6g00287 274 PRINTS Major intrinsic protein family signature 157 175 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi6g00287 274 Gene3D Glycerol uptake facilitator protein. 4 256 IPR023271 -
Vivi6g00287 274 ProSitePatterns MIP family signature. 94 102 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00287 Vivi-Chr6 7145500 7149008 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00287 37 250 Major Intrinsic Protein MIP AT5G37820 48.837 5.86e-69 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00287 K09874 - gmx:100788071 353.214