Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi6g00200 | ATGGCAATGATGATAGAGAATGAAGTGTGTTTGAGAAAGAGTCAAAGGTCCATGGAAGAAAAAGAGGTTAAAGGAGCACGTTGTGTTAAGAGACAAAGAAGAGAACATGCTGTTGCACCAAAAATAAGAGATGATAACCATAACCAAAAGCTTCATGTTGGTGTAACTGAGAATTGTGCAACTAATACTACAAAGAGAAGCTCAAAATTTCGTGGTGTTAGCAGGCATAGATGGACGGGTAGATACGAAGCTCACTTGTGGGACAAGCTTTCTTGGAACATAACACAAAAGAAGAAAGGGAAACAAGGGGCTTATGATGAAGAAGAATCTGCTGCAAGAGCTTATGATTTGGCTGCACTTAAATATTGGGGAACATCAACTTTCACCAATTTTCAGGTATCAGATTATGAGAAAGAGATAGAAATAATGAATACTATGACCAAAGAGGAGTATTTGGCCACATTAAGAAGAAAAAGCAGTGGATTTTCAAGAGGTGTTTCAAAGTATAGAGGTGTAGCAAGGCATCATCATAATGGTAGATGGGAAGCAAGAATAGGAAGAGTTTTTGGAAACAAATATCTCTATCTTGGAACCTATAGTACACAAGAGGAAGCCGCTCGAGCCTACGACATAGCTGCAATTGAGTATAGAGGAATCCATGCTGTAACAAACTTTGAATTAAGCAGTTACATAAAATGGTTAAAGCCAGAATGTTCTGTAGAACCAAACCATGAATCACTAGCACTACAAAGAGAGTCTCAAACAATAGCATCGGTGAATAACTCGACTCTATTGCAAGAATCAAAGTTATTAGCCCTTCAAAAGAGCTTTTTCATTCCAGATTATAATATGAATTCTACCGAAAACCAAGAATCATCACTTGAAAACAAAAACTATAGTTTCTTGAGTAACAAGTCAACTTCTCCAACCGCGCTTAGTCTTCTCCTTCGATCTTCGTTGTTTAAGGAATTGCTTGAAAAGAATTCAAATGTATCCGAGGATGAAGTTGCGAAAGAGCAACAGATAGCTAGTGATGATGAACTTGGAGAAATCTTTTATGATGGTATTGGAAATATCTCATTTGACTTTGATCCCAATCGATGCAGCATAGAATTGCAAGAAAGAGACTTACATTCAATGTTTTTTACATAG | 1152 | 0.3707 | MAMMIENEVCLRKSQRSMEEKEVKGARCVKRQRREHAVAPKIRDDNHNQKLHVGVTENCATNTTKRSSKFRGVSRHRWTGRYEAHLWDKLSWNITQKKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFQVSDYEKEIEIMNTMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGIHAVTNFELSSYIKWLKPECSVEPNHESLALQRESQTIASVNNSTLLQESKLLALQKSFFIPDYNMNSTENQESSLENKNYSFLSNKSTSPTALSLLLRSSLFKELLEKNSNVSEDEVAKEQQIASDDELGEIFYDGIGNISFDFDPNRCSIELQERDLHSMFFT | 383 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi6g00200 | 383 | SMART | rav1_2 | 168 | 232 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi6g00200 | 383 | SMART | rav1_2 | 69 | 138 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi6g00200 | 383 | FunFam | AP2-like ethylene-responsive transcription factor | 167 | 228 | - | - | |
Vivi6g00200 | 383 | SUPERFAMILY | DNA-binding domain | 167 | 227 | IPR016177 | GO:0003677 | |
Vivi6g00200 | 383 | ProSiteProfiles | AP2/ERF domain profile. | 69 | 132 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi6g00200 | 383 | PRINTS | Ethylene responsive element binding protein signature | 70 | 81 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi6g00200 | 383 | PRINTS | Ethylene responsive element binding protein signature | 208 | 228 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi6g00200 | 383 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 44 | 288 | - | - | |
Vivi6g00200 | 383 | CDD | AP2 | 167 | 228 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi6g00200 | 383 | ProSiteProfiles | AP2/ERF domain profile. | 168 | 226 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi6g00200 | 383 | CDD | AP2 | 68 | 134 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi6g00200 | 383 | Pfam | AP2 domain | 167 | 218 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi6g00200 | 383 | Pfam | AP2 domain | 68 | 124 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi6g00200 | 383 | Gene3D | AP2/ERF domain | 68 | 134 | IPR036955 | GO:0003700|GO:0006355 | |
Vivi6g00200 | 383 | Gene3D | AP2/ERF domain | 167 | 228 | IPR036955 | GO:0003700|GO:0006355 | |
Vivi6g00200 | 383 | SUPERFAMILY | DNA-binding domain | 68 | 134 | IPR016177 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi6g00200 | Vivi-Chr6 | 5115520 | 5117793 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi6g00200 | 65 | 230 | AP2-EREBP Transcription Factor Family | AT5G57390 | 67.456 | 7.28e-79 | 248 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-AP2 | Vivi6g00200 | AP2 | 8.8e-10 | CL0081 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vivi6g00200 | 6 | 5115520 | 5117793 | Vivi6g00200 | 6 | 5115520 | 5117793 | ECH |