Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00197 ATGTACGGATTCGAAGCTCTCACCTTCAACATCCATGGCGGTTACCTTGAGGCAATCGTCCGCGGTCACCGTTCCGGTTTACTCACCACCTCCGATTACAACAACCTCTGCCAATGCGAAACGCTTGATGATATCAAGATGCATCTCTCCGCTACCGAGTACGGTCCTTATCTCCAAAACGAACCTTCTCCGTTGCATACCACAACAATTGTGGAGAAATGTACTCTTAAGCTGGTTGATGATTACAAGCACATGCTATGCCAAGCTACTGAACCATTGTCAACCTTTTTAGAATATATCACATATGGTCACATGATAGACAATGTTGTTTTGATTGTTACTGGCACCTTGCATGAGAGAGATGTCCAAGAACTTCTAGAAAAATGCCATCCACTGGGCATGTTTGACAGTATTGCTACTCTGGCAGTTGCTCAGAATATGCGAGAGCTTTACAGGCTGGTTCTTGTTGACACTCCTCTGGCTCCATACTTCTCTGAGTGCATTACATCAGAGGACTTGGATGACATGAACATTGAAATAATGAGGAACACTCTTTACAAGGCATACCTTGAAGATTTTTACAGATTCTGTCAGAAACTAGGTGGTGCTACTGCTGAGATAATGTCTGACCTTCTAGCTTTTGAGGCTGATAGAAGGGCTGTGAATATTACCATCAATAGCATTGGTACTGAGCTTACCAGAGATGACCGTAGGAAACTGTACTCTAACTTTGGTTTGTTCTACCCATATGGTCATGAGGAACTTGCCGTCTGTGAGGACATTGATCAGGTTCGTGCTGTTATGGAAAAATACCCTCCTTACCAATCTATTTTTGCCAAGCTGTCATATGGAGAGAGCCAGATGCTTGACAAGGCATTCTACGAGGAAGAGGTCAAGAGGCATTGCTTAGCATTTGAGCAACAGTTTCACTATGCTGTGTTCTTTGCATATATGAGGTTAAGGGAGCAGGAGATCAGGAATCTTATGTGGATTTCAGAATGTGTGGCTCAGAATCAAAAGTCCAGAGTTCATGACAGTGTCGTCTTCATATTTTAG 1056 0.4328 MYGFEALTFNIHGGYLEAIVRGHRSGLLTTSDYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDDYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYRFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLFYPYGHEELAVCEDIDQVRAVMEKYPPYQSIFAKLSYGESQMLDKAFYEEEVKRHCLAFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00197 351 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT AC39 1 351 IPR016727 GO:0033179|GO:0046961|GO:1902600
Vivi6g00197 351 FunFam V-type proton ATPase subunit 14 128 - -
Vivi6g00197 351 Gene3D - 206 309 IPR035067 -
Vivi6g00197 351 Gene3D ATP synthase (C/AC39) subunit, domain 3 14 335 IPR044911 -
Vivi6g00197 351 Gene3D - 91 199 IPR035067 -
Vivi6g00197 351 FunFam V-type proton ATPase subunit 91 205 - -
Vivi6g00197 351 Pfam ATP synthase (C/AC39) subunit 16 344 IPR002843 GO:0046961
Vivi6g00197 351 PIRSF V-ATP_synth_D 4 350 IPR016727 GO:0033179|GO:0046961|GO:1902600
Vivi6g00197 351 FunFam V-type proton ATPase subunit 206 309 - -
Vivi6g00197 351 SUPERFAMILY V-type ATP synthase subunit C 14 349 IPR036079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00197 Vivi-Chr6 4999423 5003984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00197 1 351 Primary Pumps ATPases(2) AT3G28710 93.447 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00197 K02146 - gmx:100780773 704.131