Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00191 ATGTCTAGCTCTAGTTGTTCAGAGATAGAAGAGAAGAGAGTTACTTCAATTTTCCATGAAGATGATTTCTCTACTCAACAAGAAGTTTCAAAAGAGGAAGATAAACTAAAATGCGCTAAAACTGAGATGGGTGAGGTGAAAGAAGAAAATGAAAGATTGAAGACGATGCTATCGCGAGTTGAAAAAGACTACAACACCCTTCAACTCCGTTTCTTTGACATCGTTAACAAAGAAGTTTCTAACAACGGAGTAGAAGAATCATCGGTTTCACATGAAGAAAACGATGAAGAACCCGAATTCGTGTCACTTTGTCTTGGAAGAAGTCCAAATGAGTATAAGAAAGAAGCGACAAAAATTGATCAAAATTCAAACAAGCCTAAAGAAAAAGAGGACATGGAAGTTAACCTTAGTCTTGGATTAGATTCTAAATACATGTTGTCAATGGAGTTAGAATCTGATTTGACTCCAATGAATAATAGCTTAGAAGAATTACCAAAGGAAGTTGAAGTTGAAGAAAAAGGAACATTATTTTCAACAAATAAATCAACAAAGGTTATAAATGTAAACGATGATGTTTCTGATCAAATGCCTACCAAGAGAGTAAGGGTATCTGTTAGAGCTAAATGTGATACTCCAACGATGAATGATGGATGCCAATGGAGAAAATATGGACAAAAGATAGCAAAAGGAAATCCGTGTCCAAGAGCATACTATCGTTGCACGGTCGCACCAGCATGTCCAGTTAGGAAACAGGTCCAAAGATGTGCTGATGACATGTCAATCTTAATCACAACATATGAAGGAACACACAACCATCCTCTTCAAGTAACAGCATCAGCCATGGCATACACTACATCAGCTGCAGCATCAATGATGTTATCAGGCTCATCAACATCATCATCATCACATCATCAAAATCTTCATCATCAAAACTCAACATCTTTTGGGAACTCACCAGCATTACTCAACAATGGCCTAAATTTCAATCATCACCAATTCGAACAATCACGAACACCAAAACAACACTTCTTCATTCCACCAAACCATTCCTCACATAACAATTTGTTCCCAACAATCACTTTAGACCTAACTTCACCTTCATCCTTATCATCATCGTCATCGTCATTATCGAACATCGCTCCTATTCCGAGATTTTCTCCGAATAATCTCAATTTTTGTTCCGCGCAACAACCAAATTTCACTCCATCATCAACCATTTGGAACAACAACAAATTAGGGTTAGGGTTTATCAACAATAACACAATAATGCCTATGGAAAAAACTCAAATTAGGCCTTTCAACCATTTCCAAGAAAACTTCTATCAAAAGTGTGTGACAAATTATCAAACACCTTCAAGGCAAGCTTTGGCAGAAACAATAAGCAAAGCAATTAGCACTGATCCAAGTCTTCATTCAGTTATAGCAGCTGCAGTTACATCAATTGTAGGACAAGGATCAAACAATGGTGTGAATCAAAAGGAAACTAAAGAGAATGGTTTAGGTTTAGGGTTGAATTTGAAGCATGGTGAGTATCCTCAATTAGGTTCAAACAATTTGTTGAATCAAAATGGTAAAGGGTGCTTAAAGGGTGCATCATACTTCAAAAGGTTGTCACCAACAACAAGTTCACAAGCCAAGAATTTCATGCTTCTTCAACCATCATTGCCATTTTCTGTTTCTAAGAGTAGTGCTAGCAAATCTTCATCCATTGTTAATCATGTCAATCATTGTGATTCAAAGATGAACACACATCATTAG 1758 0.3669 MSSSSCSEIEEKRVTSIFHEDDFSTQQEVSKEEDKLKCAKTEMGEVKEENERLKTMLSRVEKDYNTLQLRFFDIVNKEVSNNGVEESSVSHEENDEEPEFVSLCLGRSPNEYKKEATKIDQNSNKPKEKEDMEVNLSLGLDSKYMLSMELESDLTPMNNSLEELPKEVEVEEKGTLFSTNKSTKVINVNDDVSDQMPTKRVRVSVRAKCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPACPVRKQVQRCADDMSILITTYEGTHNHPLQVTASAMAYTTSAAASMMLSGSSTSSSSHHQNLHHQNSTSFGNSPALLNNGLNFNHHQFEQSRTPKQHFFIPPNHSSHNNLFPTITLDLTSPSSLSSSSSSLSNIAPIPRFSPNNLNFCSAQQPNFTPSSTIWNNNKLGLGFINNNTIMPMEKTQIRPFNHFQENFYQKCVTNYQTPSRQALAETISKAISTDPSLHSVIAAAVTSIVGQGSNNGVNQKETKENGLGLGLNLKHGEYPQLGSNNLLNQNGKGCLKGASYFKRLSPTTSSQAKNFMLLQPSLPFSVSKSSASKSSSIVNHVNHCDSKMNTHH 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00191 585 Coils Coil 29 70 - -
Vivi6g00191 585 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 19 494 IPR044810 GO:0003700
Vivi6g00191 585 Gene3D WRKY domain 199 274 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi6g00191 585 MobiDBLite consensus disorder prediction 294 313 - -
Vivi6g00191 585 ProSiteProfiles WRKY domain profile. 209 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi6g00191 585 FunFam probable WRKY transcription factor 31 199 276 - -
Vivi6g00191 585 Pfam WRKY DNA -binding domain 215 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi6g00191 585 SMART WRKY_cls 214 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi6g00191 585 SUPERFAMILY WRKY DNA-binding domain 208 274 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00191 Vivi-Chr6 4950214 4952926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00191 43 527 WRKY Transcription Factor Family AT5G15130 41.313 7.57e-78 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi6g00191 WRKY 4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00191 - - psat:127130037 936.406