Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00158 ATGGATCCCTTCAAAGGTCAAGGTGGCATTCAAATGCTTCTAACTGCTGAACAAGAAGCTCAACACATTGTTAACACTGCAAGAAATTTGAGGACTCAAAGATTGAAGCAAGCAAAAGATGAGGCTGAGAAAGAGGCAGCTCAATATAGAACTCACATGGAAGAAGAATATCAAAAGTCAATTTCAGAGACAACTGGGAATTCAGGATCAAATGTAAGAAGGCTTGATCAAGAAACAGATGCTAAGATTAGAACCTTAAAGAAATCAGGTTCAAAGGTTTCAAATGAAGTTGTTGACATGCTACTCAAGCATGTTACAAATATTAAAATGTAA 333 0.3634 MDPFKGQGGIQMLLTAEQEAQHIVNTARNLRTQRLKQAKDEAEKEAAQYRTHMEEEYQKSISETTGNSGSNVRRLDQETDAKIRTLKKSGSKVSNEVVDMLLKHVTNIKM 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00158 110 Coils Coil 32 59 - -
Vivi6g00158 110 Gene3D - 3 110 - -
Vivi6g00158 110 FunFam V-type proton ATPase subunit G 3 110 - -
Vivi6g00158 110 NCBIfam V-type ATPase subunit G 8 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Vivi6g00158 110 MobiDBLite consensus disorder prediction 37 80 - -
Vivi6g00158 110 MobiDBLite consensus disorder prediction 60 74 - -
Vivi6g00158 110 Pfam Vacuolar (H+)-ATPase G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Vivi6g00158 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Vivi6g00158 110 MobiDBLite consensus disorder prediction 37 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00158 Vivi-Chr6 4210424 4212059 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00158 8 108 Primary Pumps ATPases(2) AT4G23710 55.446 7.59e-36 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00158 K02152 - mtr:25497458 179.489