Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00155 ATGGAATATCCAAACTCAACTACCTTCAAAATTTCAGTATTGATAATCATTTTACTAGGAGTTAAGGCTACAGGTTTCGATTTGAATCCTGTGCTTAGGGTAACCGTAGTAATTAGGAATGATATCCCTCCACATCCAACTCCTCTAGATCTCACCGTTCATTGTAAATCAAAACAAGATGATCTCGGATTTCACACACTCAAGTTTGGAGAAACTTTCATGTTTCGATTTCGCCCATCTCCGTTTCCGAAAATTGTTCAAACTTTATACTTCTGTAGCTTTACATGGCCAGGAAACGTTTATCTTCACTATCTTGATGTTTACAATCAAGGCGTAGATAACTGCAGAAATTGCACTTGGAGAATACACACCAATGGTGGTTGTACCGATTATAGAGGATACGAGCAATGTCATAACTGGAAAGGTGTTGCACTAATGGATGCAAATAATACTTCTATCATGTAA 465 0.3742 MEYPNSTTFKISVLIIILLGVKATGFDLNPVLRVTVVIRNDIPPHPTPLDLTVHCKSKQDDLGFHTLKFGETFMFRFRPSPFPKIVQTLYFCSFTWPGNVYLHYLDVYNQGVDNCRNCTWRIHTNGGCTDYRGYEQCHNWKGVALMDANNTSIM 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00155 154 Pfam Plant self-incompatibility protein S1 35 140 IPR010264 -
Vivi6g00155 154 PANTHER - 34 131 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00155 Vivi-Chr6 4179798 4180262 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00155 23 145 Carbohydrate Esterase AT3G16970 40.152 4.24e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00155 - - mtr:25497646 170.629