Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00154 ATGCTAGTAGTTGAGGCTACTGATTTCTTTATAAATCCTAAAGTAACTGTTATAATTCAGAATGATATTGATCCACACCCAATCCCCTTAGATCTCACTGTCCATTGCAAATCTAAAGATGATGATCTTGGATTTCACACACTCGCATTTGCAGGAACTTACTCGTTTCGATTTAGACCATTAGTGTTTCCAAGTTGGGCTTTCACTATATTCTTTTGTAGTTTTACATGGAAAGGAAGCCCTTATCTTCACTATCTTGACATTTACGATGAAGCCATGGATAACTGCAAAATTTGTGGTTGGAAAATAAATAAAAATGGTGGTTGTAGGCTTTATAAAGGATCGTATAAGGATTGTCAAGAATGGAAAAGCGTTCAACTAATGGATGGGAATAGTACTTCTAAGATGTAA 411 0.3528 MLVVEATDFFINPKVTVIIQNDIDPHPIPLDLTVHCKSKDDDLGFHTLAFAGTYSFRFRPLVFPSWAFTIFFCSFTWKGSPYLHYLDIYDEAMDNCKICGWKINKNGGCRLYKGSYKDCQEWKSVQLMDGNSTSKM 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00154 136 PANTHER - 12 113 IPR010264 -
Vivi6g00154 136 Pfam Plant self-incompatibility protein S1 16 122 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00154 Vivi-Chr6 4158257 4158667 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00154 7 127 Carbohydrate Esterase AT3G16970 44.961 1.81e-27 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00154 - - psat:127105312 169.859