Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00105 ATGGCAGAGGTAATAGGAGCTGAACATATGTTTATTGAGCAAACTTTTGTTTTTCCAGCAACAACAAGAAGAACAACAACGTCTCTTCCTCTAACATTTCTCGATTTGCCTTTTGCAGGTCCAAAATATGTCAAACGTCAATTCTTTTATCGTTTTCCTCATCAAACCAATCATTTTTATCAAACAACACTTCCATCTCTCAAACACTCTCTTTCCCTTACACTTCAACATTTCTTCCCCCTTCTTGGTAATCTTCATTGTCCCCCACCACCCCAGAAACCTTTTATTCTTTGCACCCAAAATGATGCTTTAACTTTGACCGTCATTGAATCCTCAGGAGATTTTAACAATCTCTCAACCAACCATCACCCAAAAAGTCTCAAAGATTTTTCTCACCTTGTTCCAAAATTAACACAAAAAATAGACCTTGAAGATAATGACACACTAATATTTTCATTGATGGCTTTGCAAGTATCTTTTTTCCCAAATCATGGTCTTTGCATTTCCATCACGTATTGTCATGTGATGGATGATTACTTTTGCAACTATTTCATGAAATCTTGGTCTTTTATTCATAAAAAAGGTAAACTAGTAGACATGAAATCACTACCTTGTTTTGACAGACAAGTCTTGAGAGACCCAAAAGATCTTGAGCAAGTTCTATTAAAAGGGTATTTTGAACAGAGGAAAATGTGGAAGAATATAATCCTTGCTGAGAGTCAAACTATAGAAAAAGAGCACCAAGATTATGTTAAGACAACTATTAGTTTTACAAAAGAAGAAATTGAGGGGATGAAAAACTGGATATTAAAGAAGTGGAAGACAACTTATCATGATATTCAAGCACCAAAATTTCTATCTAAGTTTGTTGTGACATGTGGTTTTGTTTGGGCCACTATGGTTAAAACAAAAAATAGAAATAATGATGATGCAGGAGATGAAAAAGATGAGTATTTTTGTTTCGTAGGTGATTGCAGAGATAGACTAGGGTACCCAATACCAGAGGGATATTTTGGAAACTGTTTAACATTATGTTTTGTAGCCGTAAAGAGGAAGGATGTGAAAGGAGAATATGGTTTTTTGAATGTTGTTAAAGCCATTCAAAATGCAATAACAGAGATGAAAAATGATCCATTGAAAGATGCAGAAAAGTGGGATGATATGTTTAAAAAGGTTTTTATGTCTGGTAATCATTTGTTGGTAAGTGGATCCCCTAATTTCAATGTTTATGAGACAAATTTTGAATTTGGAAATCCTATTAAAGTTGATATGATGATGCACTCATCGAAGGATATGTCTCTTGCTGAAAGTGGAGACAAAGAAGGGGGACTTGAAGTTGGGTTGATATTTAAAACAGAGGAATTAGAACAATTTTATTCTTTCATGGAACAAGGACTTAAAGCTTTGAAATTCTAA 1416 0.3411 MAEVIGAEHMFIEQTFVFPATTRRTTTSLPLTFLDLPFAGPKYVKRQFFYRFPHQTNHFYQTTLPSLKHSLSLTLQHFFPLLGNLHCPPPPQKPFILCTQNDALTLTVIESSGDFNNLSTNHHPKSLKDFSHLVPKLTQKIDLEDNDTLIFSLMALQVSFFPNHGLCISITYCHVMDDYFCNYFMKSWSFIHKKGKLVDMKSLPCFDRQVLRDPKDLEQVLLKGYFEQRKMWKNIILAESQTIEKEHQDYVKTTISFTKEEIEGMKNWILKKWKTTYHDIQAPKFLSKFVVTCGFVWATMVKTKNRNNDDAGDEKDEYFCFVGDCRDRLGYPIPEGYFGNCLTLCFVAVKRKDVKGEYGFLNVVKAIQNAITEMKNDPLKDAEKWDDMFKKVFMSGNHLLVSGSPNFNVYETNFEFGNPIKVDMMMHSSKDMSLAESGDKEGGLEVGLIFKTEELEQFYSFMEQGLKALKF 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00105 471 Pfam Transferase family 11 463 - -
Vivi6g00105 471 PANTHER - 12 468 - -
Vivi6g00105 471 Gene3D - 247 469 IPR023213 -
Vivi6g00105 471 Gene3D - 11 237 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00105 Vivi-Chr6 2574763 2576178 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00105 20 462 Monolignol Biosynthesis Gene Families AT5G48930 21.598 3.84e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00105 - - tpra:123894642 604.364