Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00063 ATGACTAGTACTACCATTTCATTCAACCACAACAACCAAAAACCAAACAACATTCATCACCAAAAAGGACTCATCATTGAAGAAATTGAAGGACTCATAAAAGTCCACAAAGATGGATATGTAGAAAGACCTCAAATTATCCCCAACGTCTCATGCAATTTTCCATCACAAAATGGTGTCATTTCAAGAGACATTACAATCAACAAAGAAACTAATTTATGGACACGTGTCTATCTCCCAACATCAACCTCTCATAATAACAAAATGCTTCCTTTGCTTGTTTATTTCCATGGTGGTGGATTTTGTGTTGGCTCTACTTCATGGATTTGTTACCATGAATTCTTAAACAACCTCGCTTCAAAAGCGAATTGCGTTGTTGTCTCGGTTAATTATCGTTTAGCCCCCGAAAATCGTCTTCCTTCTGCTTATGACGACGCTTTCAATGCTCTCATGTGGATCAAACATGAAGCGTTGTATAATAAAAACCAAAGTTGGTGGTTGAAACATTGCAACATTTCTTCTCTTTTTCTATGTGGTGATAGTGCCGGAGCTAATATAGCTTACAATGTTGTTGCTACGCGCTTAGCATCAAATTCAAACTCAAATGCGTCGCATTTGAATTTGAATCCGTTATTTTTAAAAGGTATTATATTGATCCAACCTTTTTTTGGAGGAGAAGAAAGGACGAATTCTGAGAAAAATCTTCGTCAACTACAAAATTCGGCGCTTAGTTTATCCGTTTCAGATACTTATTGGCGATTATCGCTACCTATTGGAATTTCTGTTTCGCGCGATCATCCATATTGTAATCCTCTTGCACCAAGTGGAATATCTAAGATGAGAGATTTGAGGGTTCCTTCTATTATGATATGTGTTTCGGAATTGGATATACTTCGAGATAGAAACTTGGAGTTTTCGAATTGTTTGGTTAAAGCTGGGAAAAGAGTTGAGACTTATGTTTATAAAGATGTTGGACATGCTTTTCAAGTGTTGCATAATTATCAACTTTCTCATGTTAGGACTCAAGAAATGGTGTCTCATATCAAGAACTTCTTGAATCAATAA 1065 0.3624 MTSTTISFNHNNQKPNNIHHQKGLIIEEIEGLIKVHKDGYVERPQIIPNVSCNFPSQNGVISRDITINKETNLWTRVYLPTSTSHNNKMLPLLVYFHGGGFCVGSTSWICYHEFLNNLASKANCVVVSVNYRLAPENRLPSAYDDAFNALMWIKHEALYNKNQSWWLKHCNISSLFLCGDSAGANIAYNVVATRLASNSNSNASHLNLNPLFLKGIILIQPFFGGEERTNSEKNLRQLQNSALSLSVSDTYWRLSLPIGISVSRDHPYCNPLAPSGISKMRDLRVPSIMICVSELDILRDRNLEFSNCLVKAGKRVETYVYKDVGHAFQVLHNYQLSHVRTQEMVSHIKNFLNQ 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00063 354 Gene3D alpha/beta hydrolase 31 354 IPR029058 -
Vivi6g00063 354 Pfam alpha/beta hydrolase fold 93 329 IPR013094 GO:0016787
Vivi6g00063 354 PANTHER ARYLACETAMIDE DEACETYLASE 29 332 - -
Vivi6g00063 354 SUPERFAMILY alpha/beta-Hydrolases 27 353 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00063 Vivi-Chr6 1675747 1676835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00063 4 353 Carbohydrate Esterase AT5G16080 50.420 6.33e-120 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00063 - - gmx:100819429 476.092