Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00013 ATGGATAATATTGGCAAGAGCATGAAGCATGAGAGCAAGAAAGTAGGTCTCATCACGAAAACATGGGAGAGATGCAAGTCCATAGGACGAGGAGGGGTCAAGACTAAATATCCATCCTCAGTGACTCCAACGACAAGAAGGAGCAAATCATGGCCTAATCTACGAGGCGATGAAATCAAGATAGGAAAGAAAGTTGCACCCGAAGGATGCTTTTCCGTGTATGTCGGACCTCAAATGCAAAGGTTTGTGATAAAAACCGAGTATGCCAACCATCCTTTGTTCAAGATGTTGCTTGAAGAAGCTGAATCAGAATATGGTTATAGTTGTCAAGGACCTTTGGCTCTTCCTTGTAATGTTGATATTTTTATCAAAGTGTTGATGGAAATGGACAATGAAACTCCTCCTCAAGGTTGTACTTTTGTTGGAAACCGCTCTCGTTCTTCTTATCAACTACTTAGTCCTTCTCGAATGATCTTTTTAAACAATTTTTAA 492 0.4024 MDNIGKSMKHESKKVGLITKTWERCKSIGRGGVKTKYPSSVTPTTRRSKSWPNLRGDEIKIGKKVAPEGCFSVYVGPQMQRFVIKTEYANHPLFKMLLEEAESEYGYSCQGPLALPCNVDIFIKVLMEMDNETPPQGCTFVGNRSRSSYQLLSPSRMIFLNNF 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00013 163 Pfam Auxin responsive protein 50 126 IPR003676 GO:0009733
Vivi6g00013 163 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 48 126 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00013 Vivi-Chr6 634493 635356 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00013 66 131 Calmodulin-binding Proteins AT5G20810 48.485 1.08e-17 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00013 K14488 - gmx:100777217 191.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g00013 6 634493 635356 Vivi6g00013 6 634493 635356 ECH