Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00007 ATGGAGAAAATCAACTTTGTCAAAAATGGCGAATTGAAAATGCCACCTGGTTTTCGTTTTCATCCAACTGATGAAGAACTTGTTCTTTCGTATTTGAAGCGGAAGGTGTTCTCTCTCCCTTTGCCTGCTGCAATCATCCCTGAAGCTGATCTTTGCAAGTCTGACCCATGGGATTTACCAGGTGATTTGGAACAAGAGAGGTACTTTTTCAGTACCAAAGAAGCGAAATATCCGAATGGGAACCGATCTAACAGAGCTACAAATTCTGGTTACTGGAAAGCTACTGGTTTGGACAAACAAATCACTACCTGGTCGAAATCTGAGGTTGTCGGAATGAAGAAGACTCTGGTTTTTTACAGCGGAAAACCGCCTCTTGGCTCCAGGACTGATTGGATTATGCATGAGTATCGTCTTGCTCCTTCTCACTCTAACCCTCTGAATGAAAACTGGGTTCTCTGCCGCATATTTCTAAAGAAAAGAGCCGGTACTAAAACCGGGAAAGAAACCTTCACTGTGAGGCCCAACGTGGCCAACAACAACAACCTTAGCAAGGTTGTGAAGGACTCAGCTCCAAACTCGGCTCCAAACTCATCTTCAAACTCAAGTTCTGGTTCAAAGGTTGTTGTTTTCTATGACTTTTTGGCACAGAACAACAACAAGAACACTGTTACATTTTCAATTTCACCAGCTACAAGTGGAATCACAGATGAACTGAATGAGCATGAAAATGAAGAAAGCAGCAGCTCTTAA 750 0.4267 MEKINFVKNGELKMPPGFRFHPTDEELVLSYLKRKVFSLPLPAAIIPEADLCKSDPWDLPGDLEQERYFFSTKEAKYPNGNRSNRATNSGYWKATGLDKQITTWSKSEVVGMKKTLVFYSGKPPLGSRTDWIMHEYRLAPSHSNPLNENWVLCRIFLKKRAGTKTGKETFTVRPNVANNNNLSKVVKDSAPNSAPNSSSNSSSGSKVVVFYDFLAQNNNKNTVTFSISPATSGITDELNEHENEESSSS 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00007 249 MobiDBLite consensus disorder prediction 185 204 - -
Vivi6g00007 249 ProSiteProfiles NAC domain profile. 14 158 IPR003441 GO:0003677|GO:0006355
Vivi6g00007 249 SUPERFAMILY NAC domain 10 158 IPR036093 GO:0003677|GO:0006355
Vivi6g00007 249 Gene3D NAC domain 23 162 IPR036093 GO:0003677|GO:0006355
Vivi6g00007 249 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 212 - -
Vivi6g00007 249 Pfam No apical meristem (NAM) protein 15 138 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00007 Vivi-Chr6 352793 354195 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00007 1 249 NAC Transcription Factor Family AT5G13180 53.101 8.45e-92 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi6g00007 NAM 1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00007 - - gmx:100170709 306.219