Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi698g00005 ATGGCTTATTCCTCCAATTTCTTTTCACAAGATTCACTCGCTTTCAATCCAAAAACCCACCACGAGTTTCTCCCCTTCAACGAAAACGACCCCGAAGAGATGCTTCTATACGGCATGATAACATCATCATCTTCCCAACAACATCAACAAAAACTAACCACTAGTAACAAAGAGAAAACCACCAAGTCCTACCGCGGCGTTCGTCGGAGACCATGGGGGAAATTCGCGGCGGAGATACGAGACTCAACTCGGCATGGCATAAGGGTTTGGCTTGGAACATTCGACAGTGCAGAAGCAGCAGCACTTGCTTATGATCAAGCTGCTTTTTCAATGAGAGGTTCAGCTGCAATACTGAATTTTCCAGTTGAGAAGGTTAGGGAATCGCTTAGGGATATGAACTATGTAGTGTCTAAGGATGATGAGTGTTCGCCTGTTGTTGCTTTGAAGAGGAAGCATTCGATGAGACGGAAAATGGATGAGAAGAAGAAGAAACATGAGAGGGATGTTGTTGGGATAGATAATTTGGTTGTGTTTGAAGATCTTGGTGCTGAATATTTGGAACAGTTGTTGATGTCTTATTGTTGA 585 0.4342 MAYSSNFFSQDSLAFNPKTHHEFLPFNENDPEEMLLYGMITSSSSQQHQQKLTTSNKEKTTKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGSAAILNFPVEKVRESLRDMNYVVSKDDECSPVVALKRKHSMRRKMDEKKKKHERDVVGIDNLVVFEDLGAEYLEQLLMSYC 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi698g00005 194 PRINTS Ethylene responsive element binding protein signature 64 75 IPR001471 GO:0003700|GO:0006355
Vivi698g00005 194 PRINTS Ethylene responsive element binding protein signature 87 103 IPR001471 GO:0003700|GO:0006355
Vivi698g00005 194 SUPERFAMILY DNA-binding domain 63 123 IPR016177 GO:0003677
Vivi698g00005 194 Pfam AP2 domain 63 113 IPR001471 GO:0003700|GO:0006355
Vivi698g00005 194 PANTHER DNA-BINDING DOMAIN 33 189 IPR044808 GO:0003700|GO:0009873
Vivi698g00005 194 SMART rav1_2 63 127 IPR001471 GO:0003700|GO:0006355
Vivi698g00005 194 ProSiteProfiles AP2/ERF domain profile. 63 121 IPR001471 GO:0003700|GO:0006355
Vivi698g00005 194 Gene3D AP2/ERF domain 62 123 IPR036955 GO:0003700|GO:0006355
Vivi698g00005 194 FunFam Ethylene-responsive transcription factor 2 62 123 - -
Vivi698g00005 194 CDD AP2 62 122 IPR001471 GO:0003700|GO:0006355
Vivi698g00005 194 MobiDBLite consensus disorder prediction 43 65 - -
Vivi698g00005 194 MobiDBLite consensus disorder prediction 43 60 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi698g00005 24 192 AP2-EREBP Transcription Factor Family AT3G23240 64.045 3.35e-75 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Vivi698g00005 AP2 6.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi698g00005 K14516 - qsu:111996147 237.269