Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi693g00001 ATGATGATGCAAGGAAGTGGAGAATTAACAGTTCCTCCGGGGTTCAGGTTCCACCCTACTGATGAAGAGCTTCTTTACTATTACCTGAGGAAGAAAGTTTCTTATGAAGCCATTGATCTTGATGTTATCAGAGAAGTTGATCTAAACAGACTTGAGCCTTGGGACCTCAAAGATAAGTGTAGGATTGGATCAGGGCCACAGAATGAGTGGTATTTCTTCAGCCACAAGGACAAGAAATACCCAACAGGAACAAGAACAAATAGAGCAACTACAGCTGGGTTTTGGAAAGCAACTGGAAGAGACAAAGCCATATATCACACAAATTCCAAAAGGATTGGTATGAGGAAAACCCTAGTCTTCTACACTGGACGTGCTCCTCATGGCCACAAAACTGACTGGATCATGCATGAGTACCGTCTTGACGACGATGATAATGCAGAAGTTCAGGAAGATGGATGGGTTGTATGTAGGGTTTTCAAAAAGAAAAACACAACCAGAGGTTACCAACAAGAAGTTGAAGAAGAAGATCACATGATTAACCACATGAGGTCAACAAATGGAGGTCCATGCCATCAGATGCTAGAGCAAAAACATCATCATCATCATCACATGCAACAATTAGGACTATATGATTTCAACAACAATCACCACAACAACTTTGATGGTACAATTCACCTACCACAGTTATTCAGTCCAGAATCATCAGCTCTAGCACCACAGCCACCACCACCAACTTCCTTTCACAATTCATCCATGGACATCCTTGAATGTTCTCAAAATTTGTTGAGGCTCACAACAACAAATACTACCTCTGGACTTAATCTCATGCAGCAGCAACAACATCAACAAGGGGAGAGGTTGATCAATGGAGGTGATTGGTCATTCTTGGATAAACTACTTGCATCTCATCACCATGGAAATATGGATCAGAATCTGAGAAACAAGTTATGTAACCCTCTTCATAATCAGCAGGCTGCATCTGCTGATGTTGGATCAACTTCTGCTCAGAAATTTCCATTTCATTACCTTGGTTGTGAGCCTCATTCTCATGATATTATGAAATTTTCAAAGTAA 1074 0.4088 MMMQGSGELTVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDLNRLEPWDLKDKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYHTNSKRIGMRKTLVFYTGRAPHGHKTDWIMHEYRLDDDDNAEVQEDGWVVCRVFKKKNTTRGYQQEVEEEDHMINHMRSTNGGPCHQMLEQKHHHHHHMQQLGLYDFNNNHHNNFDGTIHLPQLFSPESSALAPQPPPPTSFHNSSMDILECSQNLLRLTTTNTTSGLNLMQQQQHQQGERLINGGDWSFLDKLLASHHHGNMDQNLRNKLCNPLHNQQAASADVGSTSAQKFPFHYLGCEPHSHDIMKFSK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi693g00001 357 Pfam No apical meristem (NAM) protein 12 140 IPR003441 GO:0003677|GO:0006355
Vivi693g00001 357 FunFam NAC domain-containing protein 20 165 - -
Vivi693g00001 357 ProSiteProfiles NAC domain profile. 11 161 IPR003441 GO:0003677|GO:0006355
Vivi693g00001 357 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 248 - -
Vivi693g00001 357 SUPERFAMILY NAC domain 3 161 IPR036093 GO:0003677|GO:0006355
Vivi693g00001 357 Gene3D NAC domain 20 166 IPR036093 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi693g00001 3 357 NAC Transcription Factor Family AT1G79580 51.407 3.52e-115 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi693g00001 NAM 8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi693g00001 - - gmx:100789606 483.026