Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi692g00012 ATGGACCCACAACTTAAACCACGTGGTGGACCCTCCTCTTACAAAACAGGCCCACAAAAATTATTTCAAGTAATCCAAAATTGTGAAGCCTCCTCTTCAAAAACAGGTCCACAATTTAAACCACGTGGACCCTCCTCTTCTAAAACGGGTCCACAATTTAAACCACGTGGACCCTCCTCTTCTAAGGACTCACAACTTAAAGCATTTCAAATAACCCAAAATTGTAGACCCTCCTCTTCTAAATCAGCCTCTTTGGTTAAACCATTTAAAGTCTCCAAGAAGACAATATCTTCTGAAAACTTCAACAATAAGACATCATGGTCAAAGGTTCAAAGAACCAATGAACCTGAGGAAAACAACCCACCACTATTCAAAAGCTTTAAAAAGAAAGTTGAAGCTACAAAACCGCATTTACAGCAGCGTTATTCTGATGATGCAACTTCAAGTTACAGCAACAACAAAGAGAAAGACAGAACATCCTTTGAAAACCATTCGTCATTGATTTCTCATGAAAAGGCAAAGAACAAAGTAGAATTTGCATTGAAGCACTTTCAAACCTTTGTAAGGACGTCTACTCTTTCCGGTGATGCAATTCCTATTGAAGCGTCAAAAATTCTGAAACGTAGAGGCAAATTTGTTCACGATGAGAAAAAGATTATAGGAGATGTCCCAGGAATAGAAGTTGGTGACGAGTTTCAGTATTTTGAAGTACTCAATGTTGTTGGTCTCCATCGTAATATCTTCAATGGAATTGATCATGTCAGACATAAAGGGGAGTTGATTGCAACTAGCATTGTTTCTTGCCGGTTATATGACGATAAACTTGATGATGCCAAATTGGTGATTTCTACTGGAGAACAAGGTAATGTTATTAATAATCAAAATCAACTTAAAGAAAATCTTGCATTGATCAACAGTTATTATGCTAAGAATCCTGTTAGAGTTATAATTAAGTTAAATTCAAAGAATGGTAGTGGTAGACTTAATGGTGGTGAAAAATATTGTTATTATGGTCTTTACAAGATTGATAGGATTGATCCAGAAATTGGAAAATCGGGTTACAAGCTTCTTTTGGTTAAATCACCTGATCAGAAAAAGGTTGTTTGCAGTGAATTGAGGAAGTATAAACAAATTGTGAAAAGGGAAAAGTGCTTGGAATTTGCTGAAGATGTTTCTATGGGAAAAGAGTATCTTCCTATACCTATGATTAATTGTGTGGATTCCGAAAGTGTTCCGAATTTTCGATATATTACTCGTATGGTTAATCGGTGTAAGTCTAAAATGGTCAATCCTCTTGAAGGAAATGTTGGGTGTGAATGTGTTGGTAATTGTTCTGATTCTGATAAATGTTCTTGTGCTGTGAAGAATGGAGGAAAATTTCCATTTAACAGAAATGGAACTATTGAGGCAACAAAAAAGGACGTAGTTTATGAGTGTGGTCCTTATTGTAAGTGTTCTTCGAAATGTCGCAATAGAGTTTCTCAAAATGGAATTAAATTTCCTCTTGAGATTTTCAAGACTGAGGCAAAAGGATGGGGTGTGCGGTCAGAAAAGAAAATTCCTTCAGGAAGTTTTATATGTGAGTATTTAGGTGAGATAATTGAAGACAAGAAAGCTCTGAAAATGATTGACAACGACGAGTATTTATTTAACATTGGTAATACAAATCACATGGATGGCTTGTTTACCATCGATGCGTCTAAGTATGGTAATGTGGCGAGATTTATCAACCACAGCTGTTCTCCGAATTTGTTTTGTCAAAATATTCTTTTTGATCATGATGATGTTAGGATGCCACACATCATGCTATTTGCAGCCGAAGACATTCCGCGAAAGACAGAGCTGACTTACAATTACAATTACAAGATAGGTCAAGTGGTTGATAAAGGAGTTGTGAAGAAGAAGTATTGCTATTGTGGAGCTTCCGAATGTGTTGGTAGACTGTATTAA 1950 0.3631 MDPQLKPRGGPSSYKTGPQKLFQVIQNCEASSSKTGPQFKPRGPSSSKTGPQFKPRGPSSSKDSQLKAFQITQNCRPSSSKSASLVKPFKVSKKTISSENFNNKTSWSKVQRTNEPEENNPPLFKSFKKKVEATKPHLQQRYSDDATSSYSNNKEKDRTSFENHSSLISHEKAKNKVEFALKHFQTFVRTSTLSGDAIPIEASKILKRRGKFVHDEKKIIGDVPGIEVGDEFQYFEVLNVVGLHRNIFNGIDHVRHKGELIATSIVSCRLYDDKLDDAKLVISTGEQGNVINNQNQLKENLALINSYYAKNPVRVIIKLNSKNGSGRLNGGEKYCYYGLYKIDRIDPEIGKSGYKLLLVKSPDQKKVVCSELRKYKQIVKREKCLEFAEDVSMGKEYLPIPMINCVDSESVPNFRYITRMVNRCKSKMVNPLEGNVGCECVGNCSDSDKCSCAVKNGGKFPFNRNGTIEATKKDVVYECGPYCKCSSKCRNRVSQNGIKFPLEIFKTEAKGWGVRSEKKIPSGSFICEYLGEIIEDKKALKMIDNDEYLFNIGNTNHMDGLFTIDASKYGNVARFINHSCSPNLFCQNILFDHDDVRMPHIMLFAAEDIPRKTELTYNYNYKIGQVVDKGVVKKKYCYCGASECVGRLY 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi692g00012 649 ProSiteProfiles YDG domain profile. 221 365 IPR003105 -
Vivi692g00012 649 MobiDBLite consensus disorder prediction 150 164 - -
Vivi692g00012 649 SMART G9a_1 216 364 IPR003105 -
Vivi692g00012 649 MobiDBLite consensus disorder prediction 1 20 - -
Vivi692g00012 649 SUPERFAMILY SET domain 382 629 IPR046341 -
Vivi692g00012 649 SMART preset_2 388 484 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vivi692g00012 649 MobiDBLite consensus disorder prediction 103 123 - -
Vivi692g00012 649 MobiDBLite consensus disorder prediction 28 66 - -
Vivi692g00012 649 MobiDBLite consensus disorder prediction 135 164 - -
Vivi692g00012 649 Gene3D SET domain 382 649 IPR046341 -
Vivi692g00012 649 SMART set_7 500 626 IPR001214 GO:0005515
Vivi692g00012 649 SUPERFAMILY PUA domain-like 206 369 IPR015947 -
Vivi692g00012 649 Pfam SAD/SRA domain 220 360 IPR003105 -
Vivi692g00012 649 MobiDBLite consensus disorder prediction 103 120 - -
Vivi692g00012 649 Pfam Pre-SET motif 392 492 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vivi692g00012 649 ProSiteProfiles Post-SET domain profile. 633 649 IPR003616 -
Vivi692g00012 649 Pfam SET domain 511 620 IPR001214 GO:0005515
Vivi692g00012 649 ProSiteProfiles Pre-SET domain profile. 436 497 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vivi692g00012 649 ProSiteProfiles SET domain profile. 500 620 IPR001214 GO:0005515
Vivi692g00012 649 Gene3D - 204 381 IPR036987 -
Vivi692g00012 649 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 79 643 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi692g00012 209 649 EF-hand Containing Proteins AT5G13960 36.255 1.72e-85 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vivi692g00012 SAD_SRA 4.9e-27 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi692g00012 K11420 - psat:127129315 1005.74