Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi691g00002 ATGAGAACACTATACACTCAAGGAACAAACCTTATCAATTTACCATTTTGCCACTGTTCCCAATCCCTCTCTCCAAGCCCAAATGTTCCATTCCTCGTTCCTTCCACGCACACGAGAAATTCAACTCTAAAACCTTTTTCCATTTCCTTCAAAAACTCTCTCTTTTCTCCAATTCAAGCTTCTTCCATGGCTTCTTCCACTGTCACAGACACACAGAAACCATTCTCTGTTCTCTTTGTGTGTCTTGGCAACATCTGTAGAAGCCCAGCTGCGGAAGGGGTTTTCACAGACTTGGTTAAGAAAAGGGGGTTTGATTCGAAGTTTAGAATTGATTCTGCTGGTACAATCAATTATCATGAGGGTAATGAAGCTGACCCGAGAATGAGAGCTGCATCAAAGAGACGTGGGATTGAGATAACTTCACGTTCAAGGCCAATTAAGTCATCTGATTTTGTTGAATTTGATATTATTCTTGCTATGGACAAGCAAAACAAAGAGGATATATTGGAAGCTTTTAATAGATGGAAATTTAGAGATCCTATACCTGAAGATGCCCACAAAAAGGTTAAGCTGATGTGCTCATATTGTAAGAAGAACAGTGAAACTGAAGTCCCAGATCCCTACTATGGTGGACCTCAAGGCTTTGAGAAGGTGTTAGATTTGCTTGAAGATGCTTGTGAATCATTGTTGGATGACATTTTGGCAGAAAATAAACATATACAAGAATCCTAA 732 0.3962 MRTLYTQGTNLINLPFCHCSQSLSPSPNVPFLVPSTHTRNSTLKPFSISFKNSLFSPIQASSMASSTVTDTQKPFSVLFVCLGNICRSPAAEGVFTDLVKKRGFDSKFRIDSAGTINYHEGNEADPRMRAASKRRGIEITSRSRPIKSSDFVEFDIILAMDKQNKEDILEAFNRWKFRDPIPEDAHKKVKLMCSYCKKNSETEVPDPYYGGPQGFEKVLDLLEDACESLLDDILAENKHIQES 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi691g00002 243 Gene3D - 58 238 - -
Vivi691g00002 243 PRINTS LMW phosphotyrosine protein phosphatase signature 77 94 IPR017867 GO:0004725|GO:0006470
Vivi691g00002 243 PRINTS LMW phosphotyrosine protein phosphatase signature 204 219 IPR017867 GO:0004725|GO:0006470
Vivi691g00002 243 PRINTS LMW phosphotyrosine protein phosphatase signature 120 136 IPR017867 GO:0004725|GO:0006470
Vivi691g00002 243 CDD LMWPTP 76 231 - -
Vivi691g00002 243 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 9 238 - -
Vivi691g00002 243 SMART LMWPc_2 75 232 IPR023485 -
Vivi691g00002 243 Pfam Low molecular weight phosphotyrosine protein phosphatase 77 230 IPR023485 -
Vivi691g00002 243 FunFam Low molecular weight protein-tyrosine-phosphatase 74 238 - -
Vivi691g00002 243 SUPERFAMILY Phosphotyrosine protein phosphatases I 73 233 IPR036196 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi691g00002 14 237 Protein tyrosine phosphatase (PTP) family AT3G44620 58.431 6.13e-93 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi691g00002 K25307 - gmx:100797254 341.273