Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi68g00034 ATGTCAAGATTGGTCAAATTGAGCCTTAGGAATTGCAACTTGCAAGGACCGATTCCGGACTTAAGCTTGATACCGCACCTTCTTTTTGTTGACCTTAGCTTCAATCAGTTGAATGGATCAATTCCTCCTAATAAGCTTGCTGAAAATATCACAACTGTTATTTTATCAAACAACAATCTTACTGGAACTATTCCATCCTATTTTTCTGATCTTCCACGTCTCCAGACATTGTCGCTTGCAAACAATTCATTGGATGGAAGTGTTCCTTCCAGCATTTGGCAGAACAATATTTCAAATGCTGGTAAAAGATTGCTACTAGAGTTGCAAAACAATCAATTTATAAACATATCAGAAAATACTAATCTTCCTCCAAATGTCACACTCTTGCTTGATGGGAATCCGCTATGCTCAGATAACACACTGAATCAGTTCTGTAAACTTGAAGGAGCTGGTAGTGAAACAAATGGCACATCTCCAAAAAACTCCAGTGACCCTTGTCCAAATCAAAGATCATCTAAGATCTCAATGCAAATTGATGGCACAAGAGCTTTTACTTATGAGGAGTTGTCTGCTGCTACAAGCAACTTTGACAACAATGCTCAAATTGGACAAGGAGGCTACGGGAAGGTTTATAAAGGTATTCTTTCTAATGGAACTGTGGTTGCCATAAAACGTGCACAGCAAGGATCACTGCAAGGCGAGAAGGAATTTCTCACAGAGATAAGAATACTATCAAGGATACATCAGCGCAACCTTGTGTCTTTGATTGGATACTGTGATGAAGAAGGGGAACAGATGCTGGTTTATGAATTTATGCCCAATGGCACTCTAAGAGACCACGTTTCTGTTACATCAGAAAAACCTTTGACTTTTGCTATGAGATTGAAGATAGCACTCGAGTCAGCTAAAGGTCTCATGTATCTGCACACAGAAGCTGACCCTCCGATATTTCACCGAGATGTTAAATCAAGCAACATATTATTAGACTCTAAGTTTACTGCAAAAATTGCAGACTTTGGACTTTCACGACTTGCCCCAGTTTCAGATGTTCACGGCGTTGTACCTGGTCATGTATCCACGGTAGTAAAGGGCACACCGGGTTACCTTGATCCAGAGTACTTCTTAACTCACACATTGACTGACAAGAGTGATGTTTACAGTCTTGGTGTTGTGTTTCTAGAACTTTTGACTGGGATGCACCCCATTGCTCATGGGAAAAATATTGTCAGAGAGGTTAATCTTGCTTTCGAATCGGGCGAGATATCTTCGATCATTGATAAAAACATGGGGTCTTATCCATTTGAGTATGCAGAAAAGTTTTTAAATTTGGCTCTGAAGTGTTGTGAAGATAAGCCAGAGCCACGTCCTAAAATGGCAGAAGTGGTTAGAATACTCGAAAACATGTGTTCTGTGATGATAGATTCAAATACAATGAGAGATACATCTACAAGCAATGATTCTCGCGAAACAGTCAGCCTTCTAGGCACATCTTCATCCTCAACCAAAAAGACTCCCTTTGTATTAAGAACTGTATAA 1536 0.3978 MSRLVKLSLRNCNLQGPIPDLSLIPHLLFVDLSFNQLNGSIPPNKLAENITTVILSNNNLTGTIPSYFSDLPRLQTLSLANNSLDGSVPSSIWQNNISNAGKRLLLELQNNQFINISENTNLPPNVTLLLDGNPLCSDNTLNQFCKLEGAGSETNGTSPKNSSDPCPNQRSSKISMQIDGTRAFTYEELSAATSNFDNNAQIGQGGYGKVYKGILSNGTVVAIKRAQQGSLQGEKEFLTEIRILSRIHQRNLVSLIGYCDEEGEQMLVYEFMPNGTLRDHVSVTSEKPLTFAMRLKIALESAKGLMYLHTEADPPIFHRDVKSSNILLDSKFTAKIADFGLSRLAPVSDVHGVVPGHVSTVVKGTPGYLDPEYFLTHTLTDKSDVYSLGVVFLELLTGMHPIAHGKNIVREVNLAFESGEISSIIDKNMGSYPFEYAEKFLNLALKCCEDKPEPRPKMAEVVRILENMCSVMIDSNTMRDTSTSNDSRETVSLLGTSSSSTKKTPFVLRTV 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi68g00034 511 Gene3D Phosphorylase Kinase; domain 1 169 271 - -
Vivi68g00034 511 ProSitePatterns Protein kinases ATP-binding region signature. 202 224 IPR017441 GO:0005524
Vivi68g00034 511 Gene3D Ribonuclease Inhibitor 1 168 IPR032675 -
Vivi68g00034 511 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 272 482 - -
Vivi68g00034 511 SMART serkin_6 196 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi68g00034 511 Pfam Protein kinase domain 198 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi68g00034 511 SUPERFAMILY Protein kinase-like (PK-like) 181 483 IPR011009 -
Vivi68g00034 511 Pfam Leucine rich repeat 49 93 IPR001611 GO:0005515
Vivi68g00034 511 SUPERFAMILY L domain-like 2 140 - -
Vivi68g00034 511 CDD STKc_IRAK 202 468 - -
Vivi68g00034 511 FunFam Leucine-rich repeat protein kinase family protein 160 271 - -
Vivi68g00034 511 ProSiteProfiles Protein kinase domain profile. 196 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi68g00034 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 316 328 IPR008271 GO:0004672|GO:0006468
Vivi68g00034 511 MobiDBLite consensus disorder prediction 151 172 - -
Vivi68g00034 511 PANTHER RECEPTOR-LIKE PROTEIN 55 4 468 - -
Vivi68g00034 511 Gene3D Transferase(Phosphotransferase) domain 1 272 490 - -
Vivi68g00034 511 MobiDBLite consensus disorder prediction 476 511 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi68g00034 173 477 Receptor kinase-like Gene Family AT5G01950 64.262 1.12e-135 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Vivi68g00034 Pkinase 2.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi68g00034 - - vvo:131623420 1003.05