Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi68g00020 ATGAAGGCTGGGAAATTTCGCTCTAAATTTATGTTCATGAAGTTCTATTCTGGTTCAATGGCTTATTTCCTTTTTGTCATAGCTATTCTTTTACCTTGCGCTATTGCGGATCTTAATTCCGACAAGCAGGCCCTTCTTGATTTTATCAATGCTGTGCCGCATCGTCGAAACCTGATGTGGAATGCATCCGCCTCAATCTGTACATCTTGGGTTGGCATTACTTGCAATGAAGATAGAACTCGGGTTGCTAGTGTCCGGCTCCCTGGAGTCGGACTAGTTGGCTCGATTCCGTCAAACACACTCGGAAAGCTAGATGCTGTTAAAATAATCAGCCTTCGTTCCAACCTGCTCGGTGGAAACCTGCCGGCTGACATTGCTTCGCTTCCGTCTCTTCAGTATCTCTACCTCCAGCATAATAACTTTTCCGGAGATATTCCTACCTCGTTGTCACCTCAACTAGTTGTTCTTGATTTGTCTTATAATTCTTTCGCCGGAAGAATTCCGAAGGCGTTACAAAATTTGACAGAACTGAGTAGTTTGAATCTCCAAAACAACTCGCTATCTGGAAGCATACCAAATCTCAATCTTACCAAGCATGGTCATTTGAACTTAAGCTACAACAATTTGAGTGGACCTATCCCTTCAAATCTCCGTATTTATCCTAATTCGTCGTTTGAAGGAAACTCTGGTTTATGCGGATTGCCTCTAAAGCCATGTTCTACAGTTCCACCTCCTCCTGCCTTGACTCCTACTCCATCATCTGCTCCGGGAAAAGGCAGCTCCAAAAATAAATTGAGTAAGGTAGCTATCATCGCCATTGCGGTTGGTGGAGCCATGCTGCTATTTTTTGTAGTTCTTGTTATTGTTCTTTGCTGTTTGAAGAAAGACGGTGATGATGATGGAGGCTCTAGAGAAGTTAAAACGAAGGGTCCTAGTGGTGGCGGCGGTGGTGGTAGAGGCGAGAAGCCGAAAGAAGAGTTTGGTAGTGGAGTGCAAGAACCTGAGAAGAATAAGTTGGTTTTCTTTGAGGGAAGTTCTTATAATTTTGATCTCGAAGACTTGCTGAGAGCTTCAGCTGAAGTTCTTGGAAAAGGTAGCTATGGTACCTCATATAAGGCTATATTGGAGGAGTCTATGACAGTTGTGGTGAAAAGGCTGAAAGAAGTTGTGGTTGGCAAAAAGGAATTTGAACAACAGATGGAAATTATGGGAAGGGTTGGACAACACCCGAACGCCATACCGCTTCGTGCTTATTACTATTCGAAAGATGAAAAGCTTCTGGTTTATGACCATGTCCCTGCTGGCAACCTATCCACACTCTTGCATGGCAGTCGAGGAGGCGGAAGAAATCCATTAGATTGGGAATCGAGAGTAAAAATATCCCTTGGAACTGCGAGAGGAGTCGCGCACATTCATTCTGTCGGCGGTCCAAAGTTCACACATGGAAATATCAAGTCTTCAAACGTCCTCCTCAACCAAGATAACGACGGCTGCATTTCTGATTTCGGCCTAACCTCACTTATGAATGTTCCTGCAAACCCTTCTAGAGCTGCAGGTTACCGCGCTCCCGAGGTGATTGAAACCCGAAAGCACTCTCATAAATCAGACGTCTACAGCTTTGGTGTTCTCCTCCTAGAGATGCTCACAGGGAAAGCGCCTCTTCAATCACCAGGTCGCGACGATATGGTTGATCTCCCTAGATGGGTCCAATCCGTCGTTCGGGAGGAATGGACAGCCGAGGTTTTCGACGTCGAGCTAATGAGCTACCAAAACATCGAAGAAGAAATGGTGCAAATGTTGCAAATAGCCATGGCATGTGTGGCGAAAATGCCTGATATGAGACCAAACATGGACGAAGTGGTGAGAATGATCGAAGAAATCCGGCTATCTGACTCAGAGAACCGACCATCTTCGGAAGAGAATAAATCTAAGGACTCAAATGTTCAAACTCCTTAG 1956 0.4499 MKAGKFRSKFMFMKFYSGSMAYFLFVIAILLPCAIADLNSDKQALLDFINAVPHRRNLMWNASASICTSWVGITCNEDRTRVASVRLPGVGLVGSIPSNTLGKLDAVKIISLRSNLLGGNLPADIASLPSLQYLYLQHNNFSGDIPTSLSPQLVVLDLSYNSFAGRIPKALQNLTELSSLNLQNNSLSGSIPNLNLTKHGHLNLSYNNLSGPIPSNLRIYPNSSFEGNSGLCGLPLKPCSTVPPPPALTPTPSSAPGKGSSKNKLSKVAIIAIAVGGAMLLFFVVLVIVLCCLKKDGDDDGGSREVKTKGPSGGGGGGRGEKPKEEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTSYKAILEESMTVVVKRLKEVVVGKKEFEQQMEIMGRVGQHPNAIPLRAYYYSKDEKLLVYDHVPAGNLSTLLHGSRGGGRNPLDWESRVKISLGTARGVAHIHSVGGPKFTHGNIKSSNVLLNQDNDGCISDFGLTSLMNVPANPSRAAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMSYQNIEEEMVQMLQIAMACVAKMPDMRPNMDEVVRMIEEIRLSDSENRPSSEENKSKDSNVQTP 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi68g00020 651 FunFam pollen receptor-like kinase 1 324 431 - -
Vivi68g00020 651 Pfam Leucine Rich Repeat 153 174 IPR001611 GO:0005515
Vivi68g00020 651 Gene3D Transferase(Phosphotransferase) domain 1 432 650 - -
Vivi68g00020 651 CDD STKc_IRAK 362 627 - -
Vivi68g00020 651 ProSiteProfiles Protein kinase domain profile. 356 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi68g00020 651 PANTHER OS05G0588300 PROTEIN 24 639 - -
Vivi68g00020 651 MobiDBLite consensus disorder prediction 628 651 - -
Vivi68g00020 651 FunFam Leucine-rich repeat receptor-like protein kinase 40 150 - -
Vivi68g00020 651 Pfam Protein kinase domain 359 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi68g00020 651 SUPERFAMILY Protein kinase-like (PK-like) 360 634 IPR011009 -
Vivi68g00020 651 Gene3D Phosphorylase Kinase; domain 1 324 431 - -
Vivi68g00020 651 MobiDBLite consensus disorder prediction 298 331 - -
Vivi68g00020 651 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 432 639 - -
Vivi68g00020 651 Pfam Leucine rich repeat N-terminal domain 39 76 IPR013210 -
Vivi68g00020 651 Gene3D Ribonuclease Inhibitor 194 240 IPR032675 -
Vivi68g00020 651 MobiDBLite consensus disorder prediction 628 642 - -
Vivi68g00020 651 FunFam Leucine-rich repeat receptor-like protein kinase 151 239 - -
Vivi68g00020 651 SUPERFAMILY L domain-like 40 238 - -
Vivi68g00020 651 ProSiteProfiles Leucine-rich repeat profile. 176 198 IPR001611 GO:0005515
Vivi68g00020 651 Gene3D Ribonuclease Inhibitor 38 193 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi68g00020 15 649 Receptor kinase-like Gene Family AT5G58300 66.355 0.0 853
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi68g00020 Pkinase 2.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi68g00020 - - gmx:100796171 1015.37