Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi68g00019 ATGAATCATCAACAAGAATCGGAATTTGATTCCGGTGCTCTCAAACCTTATTATGGAAAGCTGTTTCCTTTTGCTGATATGTTTAAATGGATGTCTTATGGCCATGATGGGAAACATCCTGGTTGTGATCAGTCTTACTTTGGAAGAAGGGAATTTTCCTTCACTCTGAAAGGTGATTTTTATCTGCGTTTTCAATCGTACAACAATGTCCTGGAACTTGAAAACTCGATCAAAGATAAATGCCCTTTAAAGATTGACATTGGACCTGTCTATACAGTTGATCCTGCCAAAAGGCATGCCTATGCACAGGGTGATAATAGTGTCTTCACTCCAGTTGAGAGGGAGTTGATTTTTGATATTGATATGACAGATTACGATGATATCAGATACTGCTGCAAGGGTGCTGATGTTTGCTTGGATTGCTGGCCGTTGATGACCATAGCAATCAAAGTGATTGATACTTCCTTAAGAGATGAGTTTGGTTTTAAGCATATACTCTGGGTCTATAGTGGACGTAGAGGTGTTCATTGTTGGGTGTGTGATGGGAAGGCAAGAAGGTTGACAAATGAGCAAAGATCTGCTATTGCTGAATATTATCGTGTTTACAAGGGCAATGAAAATAGTCATAAGAAGGTTTCTTTGACTGGTGGCGCTCTTCATCCTTTCTTGGCGACATCATACACCAATGTCCTCAAGGACTATTTTGAGAAAAAACTGCTTACAAATCAAAACTTACTTGCTACTGAGGAGAGATATGAGAAGATCCTAAGCATGATTCCTGATGAATCTATTGCTTCTGAACTTAGGGGAAGATGGCAAGATAATAGACGGTCCTCTAGTGCAAAAGAAGATATTAATGTTGTGCGATGGGAACAGTGCAAGCAGTTGCTGCAGTCTGGAAAACATAAGGCACAGGGGCTGCGTAGATGTGTTGAAGAAATTGTGTTTTCCTATACTTACCCCAGGCTAGATATGGAGGTTTCGAAACATATGAATCATTTGCTTAAAGCACCGTTTTGTGTTCATCCAAAAACAGGTCGTGTCTGTGTCCCTATTGACCCAAATCGGTGTGATGAGTTTGATCCTACTACAGTACCCACCCTTTTCCAGCTTCTAGAGGAGCTTAACAATGAAGGCTCGAGAGCTGATGTTAATGGCGAATGGAGTGGAACTTCGCTTGGAAATGCTGTCAAGCTTTTCAGATCGTCATTCTTAGAACCTCTGCAGAAAGCCTGCAAGGAGGAGATAGAAAGATCTTATAATTTGAAGTTGCAGCAGTCAAAGAACTCCATAGGTTGGTAA 1302 0.4086 MNHQQESEFDSGALKPYYGKLFPFADMFKWMSYGHDGKHPGCDQSYFGRREFSFTLKGDFYLRFQSYNNVLELENSIKDKCPLKIDIGPVYTVDPAKRHAYAQGDNSVFTPVERELIFDIDMTDYDDIRYCCKGADVCLDCWPLMTIAIKVIDTSLRDEFGFKHILWVYSGRRGVHCWVCDGKARRLTNEQRSAIAEYYRVYKGNENSHKKVSLTGGALHPFLATSYTNVLKDYFEKKLLTNQNLLATEERYEKILSMIPDESIASELRGRWQDNRRSSSAKEDINVVRWEQCKQLLQSGKHKAQGLRRCVEEIVFSYTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPNRCDEFDPTTVPTLFQLLEELNNEGSRADVNGEWSGTSLGNAVKLFRSSFLEPLQKACKEEIERSYNLKLQQSKNSIGW 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi68g00019 433 Gene3D DNA primase, PRIM domain 1 414 - -
Vivi68g00019 433 SUPERFAMILY Prim-pol domain 11 377 - -
Vivi68g00019 433 PANTHER DNA PRIMASE SMALL SUBUNIT 4 418 - -
Vivi68g00019 433 Pfam DNA primase small subunit 118 353 IPR002755 GO:0003896|GO:0006269
Vivi68g00019 433 NCBIfam eukaryotic-type DNA primase catalytic subunit PriS 15 370 IPR014052 GO:0003896|GO:0006269
Vivi68g00019 433 CDD AE_Prim_S 23 362 IPR014052 GO:0003896|GO:0006269
Vivi68g00019 433 FunFam DNA primase 1 414 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi68g00019 6 433 Core DNA Replication Machinery Family AT5G41880 66.200 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi68g00019 K02684 - gmx:100780574 779.63