Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi689g00016 ATGAAGAAGAAGCTCGATACCCGTTTCCCTGCTGCTCGGATAAAGAAGATTATGCAAGCAGATGAGGATGTTGGAAAGATAGCACTGGCTGTGCCTGTTTTAGTCTCTAAAGCTCTAGAGCTATTTCTGCAAGATCTATGTGACCGCACTTATGAAATAACTCTTCAAAGAGGGGCAAAAACCATGAATTCCTTGCATTTAAAGCATTGTGTACAAAGCTATAATGTCTTTGACTTTCTGAAGGATGTAGTCAGCAAGGTTCCTGACTACGGCCATGGTCACGGCCATACTGATGCTGGTGGCGCTGATGATCAGGCCATTCCAAAAAGAAGGAAAGCAGCAGGTGATGATTGTAATGACAGCGATGAAGAAGCTAAGAGGGGCAAGATGGTTGAGTTGGGCCACCCTAGCCCTACTGGTAGGGGAAGAGGCCGAGGTAGAGGAAGAGGACGTGGTCGAGGTCGGGGACGGGCAAGTCAAAGAGAGGGACATCATCAAGAGACTGAGTTTGATCCCTTTCCTTCTATTCCCCAAGTTAGCCAACAGATTACAGATACAAATGTGGTTATACATGATATCTCAGAGCCAAGGGAGTTACCAAAGGAGAATATCGTTGCTCCTGTAGAAAACTCCGACTCACTCCGTAATATTGATCTGAATGCCAATATGAACGAAAGTGATGACAAAAAGGTCAACACAGTTGTTAATCTCGCAGTCACTATTCCTGAAGCCGCAAATCCCGATGCCGCTAATCCTGCACATGCTAATCCCGATGCCGCTAATCCTGCACCTGCTAATTCCGATGCCGCTAATCCTGTTGCCGCAATTCCTGAAGCCGGGAAAACCTCACTGTCTGAACCTGCTCCAGCAGACAGCATGCATCATGAAGAAATTCCGGGCTGGTCCCTTTCAGAGGTGGACAAGATGGCCATTGATACGATGCAGCTCGCACAGCGAATGGAAGAGGACGATGAAGATTATGACGAGGAGGACGAGTAA 999 0.4725 MKKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYNVFDFLKDVVSKVPDYGHGHGHTDAGGADDQAIPKRRKAAGDDCNDSDEEAKRGKMVELGHPSPTGRGRGRGRGRGRGRGRGRASQREGHHQETEFDPFPSIPQVSQQITDTNVVIHDISEPRELPKENIVAPVENSDSLRNIDLNANMNESDDKKVNTVVNLAVTIPEAANPDAANPAHANPDAANPAPANSDAANPVAAIPEAGKTSLSEPAPADSMHHEEIPGWSLSEVDKMAIDTMQLAQRMEEDDEDYDEEDE 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi689g00016 332 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 119 - -
Vivi689g00016 332 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Vivi689g00016 332 FunFam dr1-associated corepressor homolog 1 86 - -
Vivi689g00016 332 SUPERFAMILY Histone-fold 3 90 IPR009072 GO:0046982
Vivi689g00016 332 MobiDBLite consensus disorder prediction 155 169 - -
Vivi689g00016 332 MobiDBLite consensus disorder prediction 94 131 - -
Vivi689g00016 332 MobiDBLite consensus disorder prediction 246 332 - -
Vivi689g00016 332 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Vivi689g00016 332 MobiDBLite consensus disorder prediction 94 177 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi689g00016 9 86 CCAAT-HAP5 Transcription Factor Family AT1G54830 38.462 1.94e-12 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Vivi689g00016 CBFD_NFYB_HMF 2.7e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi689g00016 K21752 - gmx:100801593 327.02