Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi686g00003 ATGGCGGAAGAACAACCGTGTCAAGCTCCTGAAGGCCACCGTCTCTGCGCCAACAACTGCGGCATCCTCGGTAACCCGGCCACCATGAACCTCTGCTCCAAATGCTACGGTGATATTCGGTTGAAGAATCAACAAGACGCTTCCACCAAATCCACCATCGAAAATGCCCTCTCATCTTCTTCCTCCGTCGCCGCCGCCGTCGCATCCATCGCCTCACCGCCGCTTTCCACGTCAGAGCCAGTCGTTGTTTCCGCCGAATCTATCATCTCCACGTCGGCTTTAACAGAGATCGCGTCGAGTTCGGTTACCGTAACCGCAACCACATGTTCGGTTTCTGTTACGGTTCAACCGAACCGGTGTTTGAGTTGTAGAAAGCGCGTGGGGTTGACCGGGTTTAAGTGCAAGTGCGGGTCGATGTTTTGTGGGACCCACAGATACCCAGAGAGACACGGTTGTGGATTTGATTTTAAAACGGTGGGGAGGGAGGAAATAGCGAGAGCGAACCCTTTGATAAGAGCGGAGAAGCTGCAGAGGATATGA 540 0.537 MAEEQPCQAPEGHRLCANNCGILGNPATMNLCSKCYGDIRLKNQQDASTKSTIENALSSSSSVAAAVASIASPPLSTSEPVVVSAESIISTSALTEIASSSVTVTATTCSVSVTVQPNRCLSCRKRVGLTGFKCKCGSMFCGTHRYPERHGCGFDFKTVGREEIARANPLIRAEKLQRI 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi686g00003 179 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 179 - -
Vivi686g00003 179 Gene3D - 94 175 IPR035896 -
Vivi686g00003 179 Gene3D - 1 63 - -
Vivi686g00003 179 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Vivi686g00003 179 SMART AN1_Zf_4 120 157 IPR000058 GO:0008270
Vivi686g00003 179 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Vivi686g00003 179 SUPERFAMILY AN1-like Zinc finger 113 174 IPR035896 -
Vivi686g00003 179 FunFam Zinc finger AN1-type containing 6 95 175 - -
Vivi686g00003 179 Pfam AN1-like Zinc finger 122 156 IPR000058 GO:0008270
Vivi686g00003 179 Pfam A20-like zinc finger 14 36 IPR002653 GO:0003677|GO:0008270
Vivi686g00003 179 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 60 - -
Vivi686g00003 179 ProSiteProfiles Zinc finger AN1-type profile. 114 160 IPR000058 GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi686g00003 1 179 C2H2 Transcription Factor Family AT3G52800 49.162 4.34e-53 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi686g00003 - - lang:109347531 232.646