Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi685g00007 ATGGAGAATTCTAACTATGAAAACGGTTTCCAACAAATTAATGTGAAGCTAACAAGTGAACCATCACTTGTTCCACCATCTGAGGAAACAACAAAAGGAACATACTTTCTATCAAACCTTGATCAAAACATCGCGGTCATTGTTCGAACCGTTTATTGTTTCAAAAACAAAGACAAGGGAAACGAGGATGCTTGTGAAGTGATTAAGAATGCATTGAGGGATGTTCTTGTTTATTATTACCCTCTTGCTGGGAGGTTGAGTATAAGCTCAGAGGGGAAACTGATTGTGGATTGTACTGGAGAAGGTGCTCTTTTTGTTGAAGCTGAAGCTAATTGTTGTATGGAGGAAATTGGTGATATTACAAAACCTGATCCTAGGACTCTTGGGATGTTGGTTTATGATATTCCTGATGCTAAACATATTCTTCAGATGCCTCCTTTGGTTGCTCAGGTAACTAAATTCAAATGTGGAGGTTTCGCTCTTGGACTATGCATGAATCACTGCATGTTTGATGGAATTGGAGCTATGGAGTTTGTGAATTCATGGGGAGAACAAGCAAGAGGTTTACCAATCTCGATCCCTCCGGTTCTCGACCGGAGCATACTAAAAGCGCGCAATCCGCCAAAGATTGAGCATTTGCACCAAGAATTCGCTGACATCGAAGACAAATCAAACACTAACAGCTTATACGAAGACGAAATGGTGTATCGATCATTCTGTTTCGATCCCGAAAAACTAAAAGAATTGAAGAAAAAAGCCATGGAAGAAGATGAAGATGGTGTTCTTGAATCTTGCACAACATTTGAAGTGCTTTCAGCTTTTGTTTGGATAGCTAGAACAAAAGCACTTAAGTTGCTTCCAGAGCAAGAAACAAAGCTTCTTTTTGCAGTTGATGGAAGGGCTAAATTTGAGCCCAAACTTCCAAAAGGGTATTTTGGGAATGGAATAGTGCTAACAAAATCTGTTTGTAAAGCAGGTGAAATTACAAACAAGCCCTTTTCATATACTGTGAAACTTATTCAACAAGCAATTAAGATGGTGAATGATGGATACATGAGATCAGCTATTGATTATTTTGAGGTCACAAGAGCTAGGCCTTCTTTGGCTTGCACACTCTTGATCACAACATGGTCTAGGCTTTCTTTTCATATCACTGATTTCGGTTGGGGCGAACCGGTCCTGTCGGGACCGGTTGGCTTGCCGGAGAAGGAAGTGATTTTGTTCCTTTCACATGGGCAGGAGAGGAGGAACATCAATGTGCTTCTTGGTTTGCCTGCTCCTGTCATGAAGATCTTTCAAGATTTGATGAAGATTTAG 1317 0.4039 MENSNYENGFQQINVKLTSEPSLVPPSEETTKGTYFLSNLDQNIAVIVRTVYCFKNKDKGNEDACEVIKNALRDVLVYYYPLAGRLSISSEGKLIVDCTGEGALFVEAEANCCMEEIGDITKPDPRTLGMLVYDIPDAKHILQMPPLVAQVTKFKCGGFALGLCMNHCMFDGIGAMEFVNSWGEQARGLPISIPPVLDRSILKARNPPKIEHLHQEFADIEDKSNTNSLYEDEMVYRSFCFDPEKLKELKKKAMEEDEDGVLESCTTFEVLSAFVWIARTKALKLLPEQETKLLFAVDGRAKFEPKLPKGYFGNGIVLTKSVCKAGEITNKPFSYTVKLIQQAIKMVNDGYMRSAIDYFEVTRARPSLACTLLITTWSRLSFHITDFGWGEPVLSGPVGLPEKEVILFLSHGQERRNINVLLGLPAPVMKIFQDLMKI 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi685g00007 438 Pfam Transferase family 22 435 - -
Vivi685g00007 438 FunFam Spermidine hydroxycinnamoyl transferase 13 217 - -
Vivi685g00007 438 Gene3D - 217 437 IPR023213 -
Vivi685g00007 438 Gene3D - 10 216 IPR023213 -
Vivi685g00007 438 FunFam Tryptamine hydroxycinnamoyl transferase 221 437 - -
Vivi685g00007 438 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 23 433 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi685g00007 12 436 Monolignol Biosynthesis Gene Families AT5G48930 33.638 8.52e-81 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi685g00007 K15400 - gmx:100792433 748.043