Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi684g00002 ATGTCCAACAATAACCATAATCACACATTTCCAACTTCAGCTACTTTGTTGATTTTCTTGTTGCTAAATCTATGTCAAGAGATTTCATGTTTAACACAATATGAAGCCTTGTTAAAGTGGAAACAAAGTCTCCCTCAACAACCAATTCTTGATTCATGGATCATTAACAACTCAAGTTCAACGCAAACACCATGTTCATGGAGAGGTATCACTTGTGATTCAAAAGGAGATGTGACAATTCTAAACATGTCATATACTGGACTTCAAGATCAAGATTTCGGAGTTTATCCGAATCTTAATTACTTGGATTTCAGCTATAATAAGGTGGAAGGTGATTTATCTTCTAAGTGGGGGTCTTGCAAGAACTTACAATCACTCAATATGGCTGGTAATTCGGTGAATGGTAACATTCCAACTGAGATTTTTGAATTGAAGCAGTTACAAGAGCTTGATCTATCATTTAACCAATTATCAGGAACTATTCCTTCTCAAATTGGAAACTCTTCGAATTTGTATACTTTAAGTTTGGGTGGAAATAGGCTTTCTGGTAAGATTCCAATCGAAATTGGAAAGCTTTCTAATTTGCAACATTTAGACCTTTCGATGAACATGTTGTTGGGAGAAATTCCATCTCAGATAGGAGATTGTTCCAAATTGTTGAATTTAAATTTGAGTAACAATCATTTGAATGGAACGATTCCGTTCCAAATAGGACAACTTGCATCTTTACAAGACTTTTTGGACTTGAGTTACAATTCGATTTCAGGGGAAATTCCTTCGAATCTTGGCTTGCTTTCGAATTTGATAAGCTTGAATATCTCAAACAATAATTTATCAGGTTCTATTCCTGATGGAATTAGTGACATGTTGAGTTTATCAAGTCTTAACCTCTCTTACAATAATTTAGAGGGTAGTGTTCCTAAAGGTGGCAATGGCATATTCAAAGTCAATTCCTCTCATGTTATTGATTTGAGCAACAACCAAGGACTATGTGGTGAATTCCAAGGTTTGAAACCTTGTAATGTCTCACTCATTCAACCTGGTGATGGGAGTAACAAAAAAAAGGTTTGGATTCCAATTGTTGCTTCTTTAGGAGGTGCACTTTTTCTATCATTGGTGTTTGTTGGTATATTTTTCTTGTGCTACAAGAAAAGTTCAAGAACTTCAAGAATAAAAAAGCCTTCCTTTAACATACCAAATCCATTCTCAATTTGGTACTTCAACGGAAGAGTTGTATACGGCGACATAATTGAAGCTACCAACAATTTCGACGATAGGTATTGTATCGGAGAAGGAGCATTCGGGAATGTTTACAAAGCCGAACTAAAAGGAGGTCAAATATTCGCAGTGAAAAAGTTAAAATGCGATGAAGAGAATTTAGACACTGAAAGTATAAAAACATTTGAAAATGAGGTTGAAGCTATGACAGAAACAAGGCATAGAAACATTGTAAAGCTTTATGGATTTTGTTGTGAAGGGATGCATACATTTCTTGTTTATGAGTATATGGATAAAGGGAGTTTGGCTGATATGTTGATGGATGATAAGAAAGCACTAGAACTTGATTGGGTTAAAAGGGTTGAGATTGTTACAGGTGTTGCAAGTGCTCTCTCTTATATGCATCATGATTGTTCACCACTTTTGATTCATAGGGACATTTCAAGCAAGAATATTTTGTTATCTTCAAATCTTGAAGCTCATGTATCAGATTTTGGTACTGCAAGGTTTCTTAAGCCAAACTCACCTATTTGGACTTCATTTGCTGGCACATATGGTTATGCTGCTCCAGAGCTTGCTTACACAATGGCGGTGACAGAGAAATGCGATGTATTCAGCTTTGGTGTTTTAGCATTTGAGATTCTAACTGGAAAACACCCTGGTGATCTTGTATCTTACATACAAACTTCTAATGATCAAAAGATAGATTTCAAAGAGATTTTAGATCCTCGTCTACCTTCTCCTCCAAAGAATGTTTTGAAGGAGTTGGTATTGGTGGGAAACTTGGCTCTTTCTTGTTTACACACAAATCCTCAATCTAGACCTACCATGAGAAGCATAGCACAATTCCTAGAAATGGAGACTACATATAATTCTTGA 2097 0.3577 MSNNNHNHTFPTSATLLIFLLLNLCQEISCLTQYEALLKWKQSLPQQPILDSWIINNSSSTQTPCSWRGITCDSKGDVTILNMSYTGLQDQDFGVYPNLNYLDFSYNKVEGDLSSKWGSCKNLQSLNMAGNSVNGNIPTEIFELKQLQELDLSFNQLSGTIPSQIGNSSNLYTLSLGGNRLSGKIPIEIGKLSNLQHLDLSMNMLLGEIPSQIGDCSKLLNLNLSNNHLNGTIPFQIGQLASLQDFLDLSYNSISGEIPSNLGLLSNLISLNISNNNLSGSIPDGISDMLSLSSLNLSYNNLEGSVPKGGNGIFKVNSSHVIDLSNNQGLCGEFQGLKPCNVSLIQPGDGSNKKKVWIPIVASLGGALFLSLVFVGIFFLCYKKSSRTSRIKKPSFNIPNPFSIWYFNGRVVYGDIIEATNNFDDRYCIGEGAFGNVYKAELKGGQIFAVKKLKCDEENLDTESIKTFENEVEAMTETRHRNIVKLYGFCCEGMHTFLVYEYMDKGSLADMLMDDKKALELDWVKRVEIVTGVASALSYMHHDCSPLLIHRDISSKNILLSSNLEAHVSDFGTARFLKPNSPIWTSFAGTYGYAAPELAYTMAVTEKCDVFSFGVLAFEILTGKHPGDLVSYIQTSNDQKIDFKEILDPRLPSPPKNVLKELVLVGNLALSCLHTNPQSRPTMRSIAQFLEMETTYNS 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi684g00002 698 FunFam MDIS1-interacting receptor like kinase 2 503 696 - -
Vivi684g00002 698 FunFam Nuclear pore complex protein NUP107 31 186 - -
Vivi684g00002 698 ProSiteProfiles Protein kinase domain profile. 423 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi684g00002 698 SMART LRR_typ_2 289 312 IPR003591 -
Vivi684g00002 698 SMART LRR_typ_2 192 216 IPR003591 -
Vivi684g00002 698 SMART LRR_typ_2 144 168 IPR003591 -
Vivi684g00002 698 SMART LRR_typ_2 265 288 IPR003591 -
Vivi684g00002 698 SUPERFAMILY L domain-like 32 332 - -
Vivi684g00002 698 PRINTS Leucine-rich repeat signature 147 160 - -
Vivi684g00002 698 PRINTS Leucine-rich repeat signature 192 205 - -
Vivi684g00002 698 ProSitePatterns Tyrosine protein kinases specific active-site signature. 548 560 IPR008266 GO:0004672|GO:0006468
Vivi684g00002 698 Gene3D Phosphorylase Kinase; domain 1 392 502 - -
Vivi684g00002 698 ProSitePatterns Protein kinases ATP-binding region signature. 429 452 IPR017441 GO:0005524
Vivi684g00002 698 FunFam Leucine-rich repeat receptor protein kinase MSP1 386 502 - -
Vivi684g00002 698 Gene3D Ribonuclease Inhibitor 90 341 IPR032675 -
Vivi684g00002 698 Pfam Leucine Rich Repeat 267 286 IPR001611 GO:0005515
Vivi684g00002 698 Pfam Protein kinase domain 428 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi684g00002 698 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 210 340 - -
Vivi684g00002 698 Pfam Leucine rich repeat 146 205 IPR001611 GO:0005515
Vivi684g00002 698 SUPERFAMILY Protein kinase-like (PK-like) 395 692 IPR011009 -
Vivi684g00002 698 Gene3D Ribonuclease Inhibitor 31 89 IPR032675 -
Vivi684g00002 698 Gene3D Transferase(Phosphotransferase) domain 1 503 697 - -
Vivi684g00002 698 Pfam Leucine rich repeat N-terminal domain 32 73 IPR013210 -
Vivi684g00002 698 PANTHER LEUCINE RICH REPEAT KINASE 2 78 693 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi684g00002 72 596 Receptor kinase-like Gene Family AT4G08850 44.906 1.41e-137 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vivi684g00002 Pkinase 2.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi684g00002 - - gmx:100814345 927.161