Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi67g00111 ATGCCTAACAGAGCATTATTATCAACCTCTTACTCTAACAAAAAACACGACGTATTTCTCAGTTTCAGAGGCGAGGACACTCGAATCGGTTTCACCAGCCATCTCTACGATGCATTGAATCACAAATCAATCAAAACATACATAGATTACCTCCTAAACAGAGGAGAAGACGTTTGGCCAACACTTTCTGAAGCCATTGAGGATTCACATGTTTCCATCGTTGTTTTTTCAGAGAACTACGCTTCTTCGAAATGGTGTTTGGAAGAGCTTGTTAAAATACTTGAATGCAGAAAAGTTCACGGTCAAGTTGTTATACCTGTTTTCTATAAAACAGATCCTTCTCATATTAGAAATCAGAGAGGAAATTTTGAGAAAGCATTCGCTAAACATGAGAGAGATCTTGGAACTAATGAAAGTGATGAGTCAAGACGAAAAGTGCTTAATTGGAAAGCTGCTCTTACTGAAGCTGCTAATATTTCTGGATGGGACTCCAAAACTCACAAGGATGACTCTAACCTCATAGAGAATGTTGTGAATGATGTATTGCAAAAGCTACAACTGAGGTACCCTAATGAACTAGAAGGTATTGTTGGGATTGAAAAATTTTGTGGAGGGGTAGAAACATTAATGACTAGAATTCAGATACTTGGAATTTGGGGTATGGGTGGAATGGGGAAGACAACCATTGCTAAAGTGTTGTTTGCCAAATTCTTTGCCCAATATGACCATGTATGCTTTGCGAACGCAAAAGAATATTCACTCAGCAAGCTTCTATCTGAGCTACTAAAGGAAGAAATTTCACCATCTAATGTTGTAGGAACTACATTCCATATGAGGAGGCTGAGAAGTAAAAAGGTTTTCATTATACTTGATAATGTGGACAGTTTAGATCAGTTTGAATATTTATGCAGGAATTTCGGCGACCAAAGTAAGGATAGTAGACTCCTTATAACGACGAGAGACAGACAATTGCTCAGTGAAAGAGTTCAATTAATATATGAGGTCAAGCAATGGGAAGATAAAGAATCTCTAGAGCTTTTTAGCTTAGAAGCCTTCAAACAAAGCCATCCCCGAAAGGGTTACGAGGATCTTTCGCAAAGGGCAGTTGCTTATGCAGGAGGCGTTCCACTTGCTTTGAAAGTTTTGGGTTCAAATCTGCGATCCAAAGGTACTGATTTTTGGGAAAGTACTTTCAGAAAACTCGACAAGTTTCCAAAGGAAGAAATTCAAAAAGTATTAAAAGTGAGCTATGATGGATTGGATCCACTAGAGAAGAAGATATTTCTAGACATTGCATTTTTTTTCAAAGGAGAAAAGAAAGATCATGTCATAAGTATACTAAATGCTTGTGGCTTGGAAGCAAGTAGTGGAATAGAAGTCCTAGAAGACAAGGCTTTGATAACTATTTCAAATGGAAATAGAATACAAATGCACGACTTGCTAAAGAAAATGGGTTCAGACATAATACGTAAAGACTGTGGCATAAACCCTGCAACTCATACACGATTGAGCGGGAGCGAAGCGCTTGAAGTAATTAAAGAAAACAAGGGGACTAGTTCAATTGAAGACATAACACTGGATTTGTCTCAAAATAATGAGTTGCCTTTATGTTCCGACACATTCACCAAGATGAAAGCCTTAAGAATTCTTAAATTCTATATCCCATTGGGTCAGAGTTGTAGTAATGCATACCTCAACCTTCCCATGGTACTTGAGCCATTTTCTAGTGAATTGAGGTACTTTGAGTGGATTGGATACCCTTTCGAGACACTTCCACAACCTTTTTGTGCCAAGTTGCTTGTTGAGATTCATATGCCGCACAGTAATGTTAAACAACTTTGGCAGGGGATGCAGGACCTTGATAAACTAGAGGTGATTGACCTAGGTGAATGCAGACATTTTGTTCAGCTTCCGAATTTGTCTAAGGCATCAAAACTTAAATGGGTTAATCTCTCCGGTTGTGTGAGTCTGGTGGATCTTCATCCATCTGTTCTTTTGGCTGAAACACTTACTACTTTGATACTCGACGGGTGTACAAAGCTTAGGAGTGTTAAAGGCCAGAAACATTTAAAATTTCTGGAAAAGATCAGTATCATTGGCTGCACAAGTCTTGAGGAATTTGCTGTCTCCTCGGATATAATTGAAAACTTGGATTTAAGCAGTACAGGGATTCAAACACTTGACCTATCAATTGGGCTTCCTCGCAATCTTAAGCGGCTTAATCTTGAGGGTTCAAGACTTGAGTATCTTCCAGATGAGTTACCTAGCCTAACATCTATTAAGGAGCTTAGGATTTCTGGCAGTGGACTAAAAGTTAAGAAACAGCAGCTTCATGTCTTGTTTGATGGCCTACGATCTCTACAAATACTACATTTGAAGGATTGTAATAACTTGTTTGAACTCCCTGACAACATCAGTGTCCTATCAAAATTACAGGAACTAATTCTAGATAGAAGCAACGTGAAAAGGTTGCCGGGAAGCATCAGGAATCTTCAAGAGCTAGAAATTCTGTCATTGGAGGATTGCAAGGAGATTCAGTATCTTCCAGAGCTTCCCCCTCTTATCAAATTGTTAAATGCCATTAACTGCGCGTCCCTGGTTTCCGTTTCAAATTTAAAAACTATTGCAACAAAGATGATGGGAAATGCCAAAAACATTTCATTCAGGAACAGCCTGAATTTGGATGGGCGTTCACTCAAACATATAATGGAAAGTCTCAATTTAACAATGATGAGCGCTGCATTTCAAAATGTGTCTGTTAGAAGACTTCGCGTGGATGTTCACAGCTACAACTATACCAGTGTTGATGCTTGTCTACCAGGAACAAGGGTTCCAAGGCAGTTCAAATATCAAACTACTACCGAATCCTCCATTACCATTAAACTTCCTAACCATTGGAACTCACTGGGATTTCTTTACTCAGTGGTTCTTTCTCCCACAGGTGGAACGAAGAAGGGTGGAACTATGATAAAATGTCGATGCGACTTGGGAGAAGAAGGTATAAAGGATACAATGTTTAATACTTATGTCACAGAACTGAAGTCGGATCATGTTTTTGCATGGTACGATCCATTCCATTGTGACAGCATTCTCAAATATTATGAACCAAAGCTTCGGTTTGAGTTTTATGTTACTAATAATATGGACAAAGTTGATGGTTCAATCTGTATTAAAGAGTGTGGGGTACGACCTGTATGTGCTGATGAACTGCTGAGTGTTTTACATCAATTGGATTTGGATTCGGAAAAGAGAAAAGAGTTGAAGAAGGCTGTGATATTAGAATCAGGAGGTAGGATAACCTTGAAGGCAATTGAAAATCGTTTCAAGAGCATTATACAAGATTCAGAGACGGTTGAACCAGAGACAAATTCTGATTTGGAAGAGAGCAGTGTTGGAAAAGACCGACATCATAATACCTCAAAACTTTCAAAAGGTTGGAGTCGCTTCTATTCTATTGGAAAACTTCGGGTTTCATCTTTTCTAAAAAATTCAAAAATACAAACCAAGTTCAGTGCTGCAAGTGGTAGCAAGAAGAATGCCAAAAACACTACAGAAATCGTCAATAGCGAAGGAAATAAAGGAACGCTAATTGAACCTGATGATGGAACCAGTCGTGAGGAGAATATTACCAACTCTGCAGAAGTTTTCAAAAGCAAAGAAAATGAAGGAAAACCATCTGAATCTGAAGCTGAATTTCATGTACCGGTAATGTCATCTGTTGAAGACAATGCTTCTGATAACAAACCAGGTGAAAACAACAATCATTGGCAAGCTAATTTTGATGAGACTACGAATTCAGAAGAAAAATCAAATATAGCAGGAGGACAGATTACTGTTCCTGACAACAAGGATCCGATAAGTGAACCAGAACAAAGAAAAGAAAATGCACCAATAATGAATCTTAGCGAACCTGAAGGTGATCAAGAAGATGGATCAGATGAGGATCCTTTTTCTGAACTTGAGAGCATCCTGTTGGGAAGTCCAGAGTCCTCACCAAAAGCAACCTGTTCCACAAATGATGATGCTGTAAGAGAAGCTTTGCATAACCTTGAAAGCCTATTGGAAAATTCACTTGAGTCCGTTGCCAGTGATGTTGAGATACAACGGCAATTACTAATGTCTTTGGAATACATAAAACAAGCATCTCATGAAAATGTTTCTCCTAATGTTGTGAAGCTTGTCCAGAGAATGACATCCTCTATTGAGAACCTCTTCAAAGACTTTGTCGGGACTAAAAAAGTGGTTGAGGATCACATTAATGCTTTGAAAGAAAAAGAAAAGCTCAAGCAGCGAGTGAGAGATGCTAAGAAACAAAAGGAATCAAAACAGAAAGAAAAGAGTCGGTTGGAAAATGAAGTCAAGCGTCTTAAGGAAGAGGGTGAAAAGGTGGATGAAAAAATTAGAATTCTTGTTGAGCAAAAGAAAAGTATTGAGTTGGAAATAACCAAGTTGAAGGAGAGCATGGAAAGATGTGAAGGTGAAAAGAAGAAAGTGAAAAATGAGGCTAAGAATATGATAACTGAAAGCAAAGAGCTTATGTTGAATATTAAAAACTCTAAATCTGCATATGCTGCTGCCTTGTCAAAGCAAAAAAAGTTGAGAGACCAATGGGAAGGTTTTAGAATAGATTTTGCAGACAACTTTGGAAGTAGCACTACTTGA 4662 0.3837 MPNRALLSTSYSNKKHDVFLSFRGEDTRIGFTSHLYDALNHKSIKTYIDYLLNRGEDVWPTLSEAIEDSHVSIVVFSENYASSKWCLEELVKILECRKVHGQVVIPVFYKTDPSHIRNQRGNFEKAFAKHERDLGTNESDESRRKVLNWKAALTEAANISGWDSKTHKDDSNLIENVVNDVLQKLQLRYPNELEGIVGIEKFCGGVETLMTRIQILGIWGMGGMGKTTIAKVLFAKFFAQYDHVCFANAKEYSLSKLLSELLKEEISPSNVVGTTFHMRRLRSKKVFIILDNVDSLDQFEYLCRNFGDQSKDSRLLITTRDRQLLSERVQLIYEVKQWEDKESLELFSLEAFKQSHPRKGYEDLSQRAVAYAGGVPLALKVLGSNLRSKGTDFWESTFRKLDKFPKEEIQKVLKVSYDGLDPLEKKIFLDIAFFFKGEKKDHVISILNACGLEASSGIEVLEDKALITISNGNRIQMHDLLKKMGSDIIRKDCGINPATHTRLSGSEALEVIKENKGTSSIEDITLDLSQNNELPLCSDTFTKMKALRILKFYIPLGQSCSNAYLNLPMVLEPFSSELRYFEWIGYPFETLPQPFCAKLLVEIHMPHSNVKQLWQGMQDLDKLEVIDLGECRHFVQLPNLSKASKLKWVNLSGCVSLVDLHPSVLLAETLTTLILDGCTKLRSVKGQKHLKFLEKISIIGCTSLEEFAVSSDIIENLDLSSTGIQTLDLSIGLPRNLKRLNLEGSRLEYLPDELPSLTSIKELRISGSGLKVKKQQLHVLFDGLRSLQILHLKDCNNLFELPDNISVLSKLQELILDRSNVKRLPGSIRNLQELEILSLEDCKEIQYLPELPPLIKLLNAINCASLVSVSNLKTIATKMMGNAKNISFRNSLNLDGRSLKHIMESLNLTMMSAAFQNVSVRRLRVDVHSYNYTSVDACLPGTRVPRQFKYQTTTESSITIKLPNHWNSLGFLYSVVLSPTGGTKKGGTMIKCRCDLGEEGIKDTMFNTYVTELKSDHVFAWYDPFHCDSILKYYEPKLRFEFYVTNNMDKVDGSICIKECGVRPVCADELLSVLHQLDLDSEKRKELKKAVILESGGRITLKAIENRFKSIIQDSETVEPETNSDLEESSVGKDRHHNTSKLSKGWSRFYSIGKLRVSSFLKNSKIQTKFSAASGSKKNAKNTTEIVNSEGNKGTLIEPDDGTSREENITNSAEVFKSKENEGKPSESEAEFHVPVMSSVEDNASDNKPGENNNHWQANFDETTNSEEKSNIAGGQITVPDNKDPISEPEQRKENAPIMNLSEPEGDQEDGSDEDPFSELESILLGSPESSPKATCSTNDDAVREALHNLESLLENSLESVASDVEIQRQLLMSLEYIKQASHENVSPNVVKLVQRMTSSIENLFKDFVGTKKVVEDHINALKEKEKLKQRVRDAKKQKESKQKEKSRLENEVKRLKEEGEKVDEKIRILVEQKKSIELEITKLKESMERCEGEKKKVKNEAKNMITESKELMLNIKNSKSAYAAALSKQKKLRDQWEGFRIDFADNFGSSTT 1553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi67g00111 1553 Pfam C-JID domain 939 1069 IPR045344 -
Vivi67g00111 1553 PRINTS Disease resistance protein signature 372 386 - -
Vivi67g00111 1553 PRINTS Disease resistance protein signature 618 634 - -
Vivi67g00111 1553 PRINTS Disease resistance protein signature 215 230 - -
Vivi67g00111 1553 PRINTS Disease resistance protein signature 280 294 - -
Vivi67g00111 1553 SMART till_3 15 159 IPR000157 GO:0007165
Vivi67g00111 1553 MobiDBLite consensus disorder prediction 1171 1207 - -
Vivi67g00111 1553 ProSiteProfiles TIR domain profile. 14 185 IPR000157 GO:0007165
Vivi67g00111 1553 Coils Coil 1415 1515 - -
Vivi67g00111 1553 MobiDBLite consensus disorder prediction 1263 1277 - -
Vivi67g00111 1553 Pfam TIR domain 15 191 IPR000157 GO:0007165
Vivi67g00111 1553 Gene3D - 12 186 IPR035897 -
Vivi67g00111 1553 MobiDBLite consensus disorder prediction 1263 1317 - -
Vivi67g00111 1553 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 708 IPR044974 GO:0006952
Vivi67g00111 1553 Gene3D Ribonuclease Inhibitor 714 909 IPR032675 -
Vivi67g00111 1553 SUPERFAMILY L domain-like 526 850 - -
Vivi67g00111 1553 Gene3D - 187 332 IPR027417 -
Vivi67g00111 1553 Pfam NB-ARC domain 211 419 IPR002182 GO:0043531
Vivi67g00111 1553 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 162 IPR035897 -
Vivi67g00111 1553 Pfam Leucine Rich Repeat 600 616 IPR011713 -
Vivi67g00111 1553 Gene3D Ribonuclease Inhibitor 509 713 IPR032675 -
Vivi67g00111 1553 Gene3D - 338 421 IPR042197 -
Vivi67g00111 1553 MobiDBLite consensus disorder prediction 1115 1140 - -
Vivi67g00111 1553 MobiDBLite consensus disorder prediction 1171 1191 - -
Vivi67g00111 1553 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 187 - -
Vivi67g00111 1553 MobiDBLite consensus disorder prediction 1126 1140 - -
Vivi67g00111 1553 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 431 IPR027417 -
Vivi67g00111 1553 SUPERFAMILY "Winged helix" DNA-binding domain 408 493 IPR036390 -
Vivi67g00111 1553 MobiDBLite consensus disorder prediction 1214 1233 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi67g00111 12 843 WRKY Transcription Factor Family AT4G12020 29.736 2.24e-78 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi67g00111 - - cam:101515491 2254.56