Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi67g00107 ATGGAACCTCGAATTGGGAATAAGTTCCGTCTTGGTCGGAAAATTGGGAGTGGATCTTTTGGTGAGATCTATCTAGGAACCAATATTCAGACGAATGAAGAGGTTGCGGTTAAGCTTGAAAATGCCAAAACCAAGCATCCTCAATTGTTGTATGAATCGAAGCTGTATAAATTATTGCAAGGAGGAACTGGGATACCGAATGCGAAATGGTCTGGTGTTGAAGGAGAGTATAATGTCCTTGTGATGGATTTACTTGGTCCTAGTCTTGAGGATTTGTTCAATTTTTGTAATAGGAAATTGTCCCTCAAAACTGTTCTCATGCTTGCTGATCAAATGATAAATCGAGTTGAGTTTGTTCATACGAAGTCATTTTTACACCGGGACATCAAGCCAGACAATTTCCTCATGGGTTTAGGGAGGCGTGCAAATCAAGTGTACGTCATTGACTTTGGTCTTGCTAAGAAATTCAGAGACAGTAATAATCAGCACATTCCCTACAGAGAGAATAAGAATTTGACAGGAACTGCTAGGTATGCCAGTATGAATACTCATCTTGGAATTGAACAAAGCCGTAGAGATGATTTAGAGTCACTTGGATATGTTCTTATGTATTTCTTAAGAGGAAGTCTGCCTTGGCAGGGATTGAAAGCTGGTACTAAGAAGCAGAAGTATGAGAGAATCAGTGAGAAGAAAGTTTCTACTTCTATTGAGTCTCTCTGCCGCGGCTATCCCTCAGAATTTGCATCATACTTCCATTATTGTCGGTCACTGAGGTTTGATGATAAACCAGATTATGCTTATCTGAAGAGACTTTTGCGTGATCTATTCATCCGTGAAGGATTCCAGTTTGATTATGTCTTTGATTGGACCATTTTGAAATATCAGCAATCTCAAATTTCCACTCCTCCTTCCCGTGGTATTGGTCTTGCTGCCGGCCCAAGTTCTGGTCTGCCACTAACTTCTGCAAATGCTGATGGACAGTCAGGCGGAAAAGATGGTAGGCATCTTGGGTGGTCTTCAACTGATCCTACCCGTAGGAGAAACTCTGGACCTATTGCCATTGATGGAATCTTATCTAGAGAAAAAGCCCCGGTTACAAATGAATTAACTGGATCTAAAGATGCTATGTTGCCAAGTTCGAATTTCTTTCGGCCAAGTGGATCTGCAAGGCAAAGTGCCATCTTAAACAGCAGCCGTGATGCAGTTGTTGACAGTGAGACTGAGCCCTCCTCCCGACCTCCCACGCAGGACCCAAGTCAAGGAGCTATCCGGAAAAGCTCTGGTGCTCAGAGAAGTTCACATATCATGTCATCTGAGCACAACCGAGTATCATCTGGAAGAAACACATCATCAAACATAAAGAATTTGGATTCAACTCTTAGAGGCATCGAGAGTCTGCATCTAAACGACGAGAGGGCACAGTATTAG 1428 0.4244 MEPRIGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAVKLENAKTKHPQLLYESKLYKLLQGGTGIPNAKWSGVEGEYNVLVMDLLGPSLEDLFNFCNRKLSLKTVLMLADQMINRVEFVHTKSFLHRDIKPDNFLMGLGRRANQVYVIDFGLAKKFRDSNNQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYERISEKKVSTSIESLCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRLLRDLFIREGFQFDYVFDWTILKYQQSQISTPPSRGIGLAAGPSSGLPLTSANADGQSGGKDGRHLGWSSTDPTRRRNSGPIAIDGILSREKAPVTNELTGSKDAMLPSSNFFRPSGSARQSAILNSSRDAVVDSETEPSSRPPTQDPSQGAIRKSSGAQRSSHIMSSEHNRVSSGRNTSSNIKNLDSTLRGIESLHLNDERAQY 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi67g00107 475 SUPERFAMILY Protein kinase-like (PK-like) 5 289 IPR011009 -
Vivi67g00107 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Vivi67g00107 475 MobiDBLite consensus disorder prediction 304 456 - -
Vivi67g00107 475 PANTHER CASEIN KINASE-RELATED 13 430 - -
Vivi67g00107 475 CDD STKc_CK1_delta_epsilon 8 281 - -
Vivi67g00107 475 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi67g00107 475 Pfam Protein kinase domain 10 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi67g00107 475 FunFam Casein kinase I isoform delta-like 1 307 - -
Vivi67g00107 475 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Vivi67g00107 475 SMART serkin_6 9 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi67g00107 475 Gene3D Transferase(Phosphotransferase) domain 1 1 306 - -
Vivi67g00107 475 MobiDBLite consensus disorder prediction 372 456 - -
Vivi67g00107 475 FunFam Putative Casein kinase I 1 85 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi67g00107 7 222 EF-hand Containing Proteins AT2G17890 26.339 1.17e-13 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Vivi67g00107 Pkinase 5.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi67g00107 K02218 - gmx:100787808 788.875