Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi67g00101 ATGTCAAGCTCTCACAAAAAGAACGATGTGTTCATTAGCTTTAGAGGTGAAGATACCCGTGAAACCTTGACAAGCCATCTCTACGATGCACTCAAGAAAGAAAAAATCGAAACATACATTGACTACAAACTTCAAAAAGGAGATCAAGTTTGGTGTGAACTCGTCAAAGCAATTCAACATTCAACTGTGTCTATCGTTGTGTTTTCAGAAAACTATGCTTCCTCGAAGTGGTGTTTAGATGAACTTGTTCAAATACTTGAATGTAGAAAAAATAACGGTCAAGTAGTTATACCAGTGTTTTATAGAGTAGATCCATCACATATTCGTCATCAGAAAGAGAGTTATGAGAGAGCATTTGCAAAATATGAGAGACAGATTAGGAATGATGAATCTCATGAAGAGAAAGTGTTGGGTTGGAAAGCTGCACTCAGAGAAGCTGCTAATATTTCTGGATGGGATTCATCTACTTTCAAGGATGATTCTCATGTCATCGAGAATATTGTGAGAGATGTTTGGCAGAAGTTGACCCTGATGTATCCTAAGGTCTTGAAAGGCATTCAAATTGATGAAAACAGTAAACATGTTGATTTATTACTGAAAAAAGTTTCAAGAATTGGAATATGGGGTATGGGTGGCATAGGAAAGACAACCATAGCAAGACTCATGTTTGTGAAAAACATTGCAAAATATGACAGTGTATGCTTCATGGAAAAGGTAAAAGAAGAATCAGAAAAGCTCGGACTAACACAAGTACGTAATAATATTTTTAGCGAGCTACTAAAGAGACAGATTACTGCATCAGATGTTATTGGAGACACATTCATTAAGAGGAGGCTCAGTGGTAGAAAAGTTTTCATTGTACTTGATAATGTCAGTAATGCTGCACAATTAGATTATTTGTGTGGAGAACTTGATGAACTTGGACCAAACAGTAGACTCATTATCACAACAAGAGACAGGCACACACTCAGGGGAAGAGTTGATGCTATACACGAGGTTAAAAACTGGAACTTCGAAGAATCTTTAAATCTTTTTATATTTGAAGCCTTCAAGCAAAGCTGTCCGCAAAAGGGTTACGAGGGTCTTTTGGAAAGGGCTGTTGAATATGCAGGAGGAGTTCCATTAGCTTTGAAAGTTTTAGGTTCTCATTTTCATTCTAGAAGTCCTAAATTTTGGAAATCTGAATTGGATTATTTGAAGGACAAAAGAGAATGCATGGATGAAATTCAAAAAGTGCTACAAGTGAGCTATAGTGGATTAACAAAGCGTGAGAAGGAAATTTTTCTAGACATTGCATTCTTTTATGAAGGTGAAAGTAAAAATTTCGCCACAAAGATACTAGATGCATGTGGTTTGAGCGCTACTAGTGGGATAGAAATACTTGAAGATAAAGCTCTTATAACTATTTCAATTAGTAATACAATACAAGTTCACGACTTACTACAACAAATGGCTTTTGATATAGTTCGTAATGACCAAGGAAAGCGTAGCCGATTGAGGGATATTGAAGAAGTTCGCGATGTACTTAAATATAAAAAGGGGGCTGATGTTGTGGAAGGCATAATATTCGATTTGTCTCAAAAATCAAATTTATATGTCAAAGCCGACGTATTTGACATGATGGTTGATTTACGATTTCTTAGACTATATGTACCCTTGGGTAAGAAGAGATTGGCTACCTTGAATCATTCTGATCAAGGCATTAAGCAATTTTCTGATAAACTTAGATACCTTGAGTGGAATGGATACCCTTTCAAGTGTCTTCCAGATCATTTTTGTGCTGAGTTTCTTGTTGAGATTCGCTTGCCGCATAGCAATGTAGAGTATCTCTGGCACGGGATACAGGAACTTGTGAATTTAGAGGCAATCGACCTAAGTGAGTGCAAACATTTGACCAACCTCCCTGATTTGTCTGAGGCGTCAAAACTCAGATCGTTGTACCTTTCAGGCTGTGAAAGTTTGTGTGAAATTCAACCTTCTATTTTTTCTAAGGACACGCTTGTTACTCTATTGCTTGATAGGTGCACAAATCTGCAAAGTCTCGTGAGTGAGAAACATTTAAAATCTCTACAAAAGATCAATGTCTACGGATGTTCAAGCCTGAAGGAACTTTCATTGTCCTCTGATTCAATTGAAAGTTTGGATTTAAGCAATACAGGAGTTGAAATATTGCATTCTACAATTAGTGGTATGAGCAATCTTCTGTGGCTCAACTTAGAAGGTTTAAAACTCACAAATCTACCGAATGAGTTGTCTTGTCTCAGATTACTTACTGAACTTCGACTTTCTAACTGTGATATAGCAACTAAATCGAACTTAGAAGGCATATTTGATGGCTTGGAATCATTGAAAATACTATATTTAAAAGATTGTGGTAACTTGGTTGAACTCCCTACAAACATCAATTCTTTATCGTCATTGTATGAGTTAAGACTAGATGGAAGTAGTTTGGAGACGCTACCTTCAAGCATCAAGTTTCTTTCAGAGTTAGAGATTTTATGCTTAGACAATTGCAGAAAGCTTCATTCTCTCCCAGAGCTTCCTCCAGAAATCAAAGAGTTTCGTGCTGAAAACTGCACTTCATTGGTCACTGTATCCAGTTTGAAAACTTTTGCAGAAAAGATAAAAGGAAAGGAGAAATACATTTCATTCAAGAATGACATGATGATGAATTTGAATCGACCTTCATTCAACTGGGTTGTGGAAGATGTCATATTAACAATGCAGAGCGTTGCATTTCACAACATATTAGTAAGGCAATACAGTTTGGATGCCCACAGCTACAATTATAACAGTGCAGTGGTTTGCTTACCAGGAAGCGAAGTTCCATGCCAGTTCAAATACCGAACATCAGACTCCAAAATAACTATTGGATTTCCTGACATATATTACTCCTTGGGATTCATTTTCTGGGTGGTTATTTCTCCATCCAATAGAATGAAGAATGAGGATGGTAGTGGTGCTAAAATTCAATGTAAATGTTACAGAGAAGATGGCAATAGGGTGGGAATTGTGAATAAGTGGTATAGTGAACCTATTACAAATTTAAGCATGGATCATGTTTTTGTGTGGTATGATCTGTACTATTCTCACAGCATACTCGGTTATGGTAAAAGGAATGTTTCATTTGAATTTTTCCTTACAAATGATATGAAGGAACATGATGGCTTCTTCAATATAAAAGAATGTGGTATTTCCCCAATCTTATCAACAGAGTTGCCAAGGCTTTTAAACAAAATAAATTTGAGTGCGGACATGAAATCAGATTTGTATAATGCAGTGAAACTCCAGTCAAAGTGA 3300 0.3652 MSSSHKKNDVFISFRGEDTRETLTSHLYDALKKEKIETYIDYKLQKGDQVWCELVKAIQHSTVSIVVFSENYASSKWCLDELVQILECRKNNGQVVIPVFYRVDPSHIRHQKESYERAFAKYERQIRNDESHEEKVLGWKAALREAANISGWDSSTFKDDSHVIENIVRDVWQKLTLMYPKVLKGIQIDENSKHVDLLLKKVSRIGIWGMGGIGKTTIARLMFVKNIAKYDSVCFMEKVKEESEKLGLTQVRNNIFSELLKRQITASDVIGDTFIKRRLSGRKVFIVLDNVSNAAQLDYLCGELDELGPNSRLIITTRDRHTLRGRVDAIHEVKNWNFEESLNLFIFEAFKQSCPQKGYEGLLERAVEYAGGVPLALKVLGSHFHSRSPKFWKSELDYLKDKRECMDEIQKVLQVSYSGLTKREKEIFLDIAFFYEGESKNFATKILDACGLSATSGIEILEDKALITISISNTIQVHDLLQQMAFDIVRNDQGKRSRLRDIEEVRDVLKYKKGADVVEGIIFDLSQKSNLYVKADVFDMMVDLRFLRLYVPLGKKRLATLNHSDQGIKQFSDKLRYLEWNGYPFKCLPDHFCAEFLVEIRLPHSNVEYLWHGIQELVNLEAIDLSECKHLTNLPDLSEASKLRSLYLSGCESLCEIQPSIFSKDTLVTLLLDRCTNLQSLVSEKHLKSLQKINVYGCSSLKELSLSSDSIESLDLSNTGVEILHSTISGMSNLLWLNLEGLKLTNLPNELSCLRLLTELRLSNCDIATKSNLEGIFDGLESLKILYLKDCGNLVELPTNINSLSSLYELRLDGSSLETLPSSIKFLSELEILCLDNCRKLHSLPELPPEIKEFRAENCTSLVTVSSLKTFAEKIKGKEKYISFKNDMMMNLNRPSFNWVVEDVILTMQSVAFHNILVRQYSLDAHSYNYNSAVVCLPGSEVPCQFKYRTSDSKITIGFPDIYYSLGFIFWVVISPSNRMKNEDGSGAKIQCKCYREDGNRVGIVNKWYSEPITNLSMDHVFVWYDLYYSHSILGYGKRNVSFEFFLTNDMKEHDGFFNIKECGISPILSTELPRLLNKINLSADMKSDLYNAVKLQSK 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi67g00101 1099 FunFam Disease resistance protein (TIR-NBS-LRR class) 4 177 - -
Vivi67g00101 1099 SUPERFAMILY L domain-like 523 865 - -
Vivi67g00101 1099 Gene3D Ribonuclease Inhibitor 710 882 IPR032675 -
Vivi67g00101 1099 Gene3D Ribonuclease Inhibitor 553 709 IPR032675 -
Vivi67g00101 1099 SUPERFAMILY "Winged helix" DNA-binding domain 407 509 IPR036390 -
Vivi67g00101 1099 Coils Coil 112 132 - -
Vivi67g00101 1099 Gene3D - 4 176 IPR035897 -
Vivi67g00101 1099 PRINTS Disease resistance protein signature 615 631 - -
Vivi67g00101 1099 PRINTS Disease resistance protein signature 204 219 - -
Vivi67g00101 1099 PRINTS Disease resistance protein signature 370 384 - -
Vivi67g00101 1099 PRINTS Disease resistance protein signature 278 292 - -
Vivi67g00101 1099 Gene3D - 337 421 IPR042197 -
Vivi67g00101 1099 Pfam Leucine Rich Repeat 596 615 IPR011713 -
Vivi67g00101 1099 Pfam NB-ARC domain 204 417 IPR002182 GO:0043531
Vivi67g00101 1099 Gene3D - 177 330 IPR027417 -
Vivi67g00101 1099 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 707 IPR044974 GO:0006952
Vivi67g00101 1099 ProSiteProfiles TIR domain profile. 6 175 IPR000157 GO:0007165
Vivi67g00101 1099 Pfam TIR domain 9 181 IPR000157 GO:0007165
Vivi67g00101 1099 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 199 431 IPR027417 -
Vivi67g00101 1099 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 152 IPR035897 -
Vivi67g00101 1099 SMART till_3 7 149 IPR000157 GO:0007165
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi67g00101 3 833 WRKY Transcription Factor Family AT4G12020 31.221 5.12e-86 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi67g00101 - - psat:127076353 1274.23