Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi67g00075 ATGAACACCAAAAACAATAACACCACTCAAGCTTGTGCTGCATGCAAATACCAACGTAGAAAATGTGCACCTGATTGCATCTTAGCGCCTTATTTCCCTCATGATCGTCATAGACAATTCATCAATGCTCACAAATTGTTTGGTGTTAGCAACATCAACAAAATCATTAAGTATCTTGATCCTCCTAGCAAGGATCAAGCCATGAGAACCATTATTTTTCAATCTGATATGCGGGCCAATGACCCTGTTGGCGGATGTTACAGATATATTCAAGATCTTCAAGCTCAGATTGAATATCATAAAAATGAACTCGATCTTGTTCATCAACAACTCGCGATTCTCCGAGCTCAACAATCTCAACAACAACAACAAGAAGTTAGTTATGGTGATCAAGTTATTATGAATCAAGATTCTTTGTTAGGGTTCTATAACCCATCATCGGGATCGCTTGCGCCGGCTAATTATCATTACAATATTCAAAATCAAGATGTGCCACAATTACAAGAACCGGATCAAGAACAATACATTATGATGCAAGAAAGTAATAGTAGTAGTATTAATAGTACTAATACTCCTTTGCAACAACATGTTAATAATTGGGGGGCTATGCAAAATTCTATTTCTTTATCATCTTTGTCATTGCATGGACAAAGTAGTAATGCTAGTGATGATTATGATCATAAGCCAATTCTTGATATTCCTTGTGATGAAAGAAATGAATTAGGGTTTGATTCCGGTGAAATACTACAAAACAGTGATGAAAATGATATGGTTTTGTATAAGATAGATAATGGAGTAATTAAAGCAGAAGATGATTATATTCAACAAGTTCAAGTTGAAGGTCAATCTCAAGAACAAGATCATGATCTGAAAAGTGCAGCAACATTGTTTACTCTTACAAATTGTAATAGTTATGATCAAAGTGTTAATTAG 933 0.3462 MNTKNNNTTQACAACKYQRRKCAPDCILAPYFPHDRHRQFINAHKLFGVSNINKIIKYLDPPSKDQAMRTIIFQSDMRANDPVGGCYRYIQDLQAQIEYHKNELDLVHQQLAILRAQQSQQQQQEVSYGDQVIMNQDSLLGFYNPSSGSLAPANYHYNIQNQDVPQLQEPDQEQYIMMQESNSSSINSTNTPLQQHVNNWGAMQNSISLSSLSLHGQSSNASDDYDHKPILDIPCDERNELGFDSGEILQNSDENDMVLYKIDNGVIKAEDDYIQQVQVEGQSQEQDHDLKSAATLFTLTNCNSYDQSVN 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi67g00075 310 Coils Coil 90 110 - -
Vivi67g00075 310 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Vivi67g00075 310 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Vivi67g00075 310 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 168 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi67g00075 10 175 AS2 family AT3G13850 59.036 6.87e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vivi67g00075 LOB 4.3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi67g00075 - - cam:101515615 405.601