Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi67g00058 ATGGCTTCTTCTTCTTCTCGCGCCACTGCTAAGGCACCTTTGAAAAAATACGATGTTTTCATCAGCTTTAGAGGCGACGATACTCGTGCTGCCTTCACTAGCCATCTTCATGCTTCTCTGTGCCGAAGCTATTTGGAGACTTACATAGACTACATAATCCAAAAAGGAAACGACGTTTGGGAAGAACTTGTGAAAGCAATCAAACAGTCCACTCTCTTTCTCGTGGTGTTCTCACATGAATATGCGTCTTCAACATGGTGTTTGAATGAACTTGTTGAAATTATGGAGTGCCATAAAAATAAACAGAACAACGTTGTTGTTATTCCCGTGTTCTACAAAATTGATCCTTCGCAAGTTCGGAAGCAGACTGAGAATTACGCCACTGCATTTGCGAAACACAAGAAGCAACACAAAGACAAGATTCAAAAGTGGAAGGATGTTCTTTCTCAAGCTGCAAATTTATCTGGTTTTCATTCTACAGCATACAGGAATGAAGCTCACTTGATTGAAGAAATTACAAGATCTGTTTTAGGAAAACTAGATCACAAGTACCAAAATGAGCTTGCAAGTGATTTCATACTCAATCAAAACTATTGGAGCATTGAATCTTTATTCAAAATTGATTCGGCAGGAGTTCATGTCATTGGACTTTGGGGCATGGGGGGCATAGGCAAGACAACCCTTGCCGAAGCTATTTTTCACAAGTTCTCTTTTCAATATGAAGGCAGATTCTTCTTCAAAAATGTGACGGAAGAATCAGAAAGGCATGGAATCAATTACACATTCAATATACTTCTTTCAAAGTTACTAATGGAAGATCTTCATATTGGCTCTCCCAAAGTAATGCCACCCGCAGTCATGAGAAGACTCAAACGCATGAAAGCTTACATTGTATTAGATGATGTTCGTACCTTAGAACTTCTACAGAGCTTGATTGGAGTTGGGCATGGTTGGCTAGGAGCTGGCAGCACAGTCATTGTGACGACTAGGGATAAGCATGTGCTGGAAAGTGGAGGAATTGACAAAATTCATCAAGTTAAGCAGATGAACTCCCAAAACTCCCTCCAGCTTTTCAGCTTGAATGCTTTTGAAAAAGTTTTTCCTGAGGAAAGATACTTCGATCTCTCAAAAAGGGCAATTGATTATGCCAATGGCAACCCTTTAGCTCTGAAAGTTTTAGGATCATCTCTTCGTTCTAAAAGTGAAATAGAATGGGAGTGTGCACTAGCTAAACTCAGAGAATATCCCAACAAAGAAATTGATTTGATTTTGAGACGGAGTTATGATGAATTGGATGATACAGAGAAAAACATATTTTTGGACATTGCATTTGGTTTCAAAGGACATAAAAGGGATATGATAACAAGAATATTAAATAAATATGGTTTCTATGCAGAAATAGGGATAAGAAATCTTTTAGACAGGGCTCTTATAAGAGTTGACTTCGAAAATTGCATACAGATGCATGACTTGATACAAAAAATGGGCAAACAAGTTGTTCGTGAAGAATCTCCGAAGAATCCCGGACAACGCAGTAGATTGTGTGATCCTAAAGAAGTTTGTGATGTATTGAAAAATGATAGAGGAACTGAGATGGTTGAAGCTATATTTTTAGATGCTCCAGAATGTACACATGTAAATTTAAGCCCCAAAGCATTTGCAAAGATGCCAAAACTAAGACTTCTTGCTATTCGAGACCACAAGGGAGTTAAATCTATAAGACTTCCAAGTGGCCTTGACTTATTGCCAGAAAATCTGAGATATTTTCAATGGGATGGCTATCCATGGAAATCTCTGCCACCAAGCTTTTGTCCGGAAATGCTTGTGAAGTTTTCCTTGGGAGGCAGCCATTTAGAAAAACTTTGGAATGGAGTACTGAATTTGCCAAATTTAGAAATACTTGACCTCAGTGACTCCCAAAAGCTGATAGAGTGTCCAAATGTATCTGGTTCTCCAAATCTAAAAGAAGTAATGCTTACTAGGTGTGCAAGCTTGCCTGAATTGGATTCATCAATTTTCCTTCTCCAAAAGCTTGAAATTTTATTGATGAAAGACTGCAGGTCGCTTAAGACTCTTTCGAGTAACACATGTTCACCAGCTCTAATTTACTTGGATGCCATGTGTTGCAACAATCTGCAAGAGTTCTCAGTCGCATTTGCTTCCGTAGATAGTTTGAGTTTGTCTTTACCAAAGTTTGGCGTGAATGAACTCCCATCCTCACTATTGCATTTAAAAAATATTGAATGGTTTACTAGTCCTATCAGTAATAGTCTTGTGGATCTTCCTGAAAACTTTGCCATTAATATTTGTCTTTCGAGTGAGAGTGATGATGAACATGACGTTTCCATCACTTTACGTAAAGTACTTTCTAGCCCTGTCTTTCTGAGTGTAAAACAGTTAATCATTCAACACGTTTCTATCTTGTTTAAAATACCAGACAATATCTCCTTACTATCATCATTAGTGTTTTTATCGCTAATTAGTATTGAAATTAGAAGCTTGCCTGAAAGCATTAAGTATCTTCCTCGACTCAAATATCTTGAAGTTATCCATTGTGAAATGCTTCAATCTATCCCTGCACTTTCACAGTTCATTCCATATTTCTTTGTCGGGGAATGTGGATCTCTTGAAGAAGTATCAAGTTCAACGAATGAACCATCTCATAAACCTTACCATGGCTTTATGTTCCTTAACTGCACAAAGTTGGATTTTCATTCATATCAAACAGTTCTGAACGACGCCATTGCTGGGATTGAACTTGGAGCAAGACTAAGTTCAGAAAATGGAGATACATCTTTATGTCATGATAATGATATTATTAAGTACTTCTTACCTGCCATGTCTGGCATGGAAAATTGGTCCCCTTACCCTTCTACACAAGCTTCTGTCACTCTAGAGCTTCCTTCCAATTTGTTGGGTTTTGCCTACTACATGGTTCTTTCTCAAGGCAATGTGGGAAATGTTGTAGATTTTATATGTGAGTGCTGCTTGGACAACAGTTCAGGTGAAAGGATCTATATAACAAGTTTCCAAAGAGCCTGCGTCTCCAGTATTGTCTTTTCTGATATCGATTCTACAATGTACATGTGGTCGGATCATTTGGTTTTATGGTATGATTCAGCAAGTTGCAAGAAGATAATGGAAGCAGTTGAAGAAATAAAAGCCAGTATTGATGTGAACAACACCAGTTACAATCCAAAGCTTACATTTAGATTCTTCATTGAAGAAAGCCGATATAATGAAGTGACTATAGTCGAGTGTGGTTTTCACTGGATATATCCCTTTGAAGACAGTGCAGCTCCAAATAGAAATGATGATCTAGAATATACAGTTCCTCCAACAAACAAGTTAGAGCAAAGTGTTGTTGGAACTCTTTCCAGCTTAGAAGTGTTTGAAAGTGAAGACTTGAGCTATTCACTCGAACGACTCTTGGATACGATGGAGAGCAGCTGGAGTGGAGAGAAGAAAACTTCAAGTGATTTAAAGAGGCACAACAAATAG 3501 0.3813 MASSSSRATAKAPLKKYDVFISFRGDDTRAAFTSHLHASLCRSYLETYIDYIIQKGNDVWEELVKAIKQSTLFLVVFSHEYASSTWCLNELVEIMECHKNKQNNVVVIPVFYKIDPSQVRKQTENYATAFAKHKKQHKDKIQKWKDVLSQAANLSGFHSTAYRNEAHLIEEITRSVLGKLDHKYQNELASDFILNQNYWSIESLFKIDSAGVHVIGLWGMGGIGKTTLAEAIFHKFSFQYEGRFFFKNVTEESERHGINYTFNILLSKLLMEDLHIGSPKVMPPAVMRRLKRMKAYIVLDDVRTLELLQSLIGVGHGWLGAGSTVIVTTRDKHVLESGGIDKIHQVKQMNSQNSLQLFSLNAFEKVFPEERYFDLSKRAIDYANGNPLALKVLGSSLRSKSEIEWECALAKLREYPNKEIDLILRRSYDELDDTEKNIFLDIAFGFKGHKRDMITRILNKYGFYAEIGIRNLLDRALIRVDFENCIQMHDLIQKMGKQVVREESPKNPGQRSRLCDPKEVCDVLKNDRGTEMVEAIFLDAPECTHVNLSPKAFAKMPKLRLLAIRDHKGVKSIRLPSGLDLLPENLRYFQWDGYPWKSLPPSFCPEMLVKFSLGGSHLEKLWNGVLNLPNLEILDLSDSQKLIECPNVSGSPNLKEVMLTRCASLPELDSSIFLLQKLEILLMKDCRSLKTLSSNTCSPALIYLDAMCCNNLQEFSVAFASVDSLSLSLPKFGVNELPSSLLHLKNIEWFTSPISNSLVDLPENFAINICLSSESDDEHDVSITLRKVLSSPVFLSVKQLIIQHVSILFKIPDNISLLSSLVFLSLISIEIRSLPESIKYLPRLKYLEVIHCEMLQSIPALSQFIPYFFVGECGSLEEVSSSTNEPSHKPYHGFMFLNCTKLDFHSYQTVLNDAIAGIELGARLSSENGDTSLCHDNDIIKYFLPAMSGMENWSPYPSTQASVTLELPSNLLGFAYYMVLSQGNVGNVVDFICECCLDNSSGERIYITSFQRACVSSIVFSDIDSTMYMWSDHLVLWYDSASCKKIMEAVEEIKASIDVNNTSYNPKLTFRFFIEESRYNEVTIVECGFHWIYPFEDSAAPNRNDDLEYTVPPTNKLEQSVVGTLSSLEVFESEDLSYSLERLLDTMESSWSGEKKTSSDLKRHNK 1166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi67g00058 1166 SMART till_3 16 154 IPR000157 GO:0007165
Vivi67g00058 1166 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 442 IPR027417 -
Vivi67g00058 1166 Gene3D Ribonuclease Inhibitor 536 725 IPR032675 -
Vivi67g00058 1166 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 182 - -
Vivi67g00058 1166 Pfam NB-ARC domain 202 432 IPR002182 GO:0043531
Vivi67g00058 1166 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 885 IPR044974 GO:0006952
Vivi67g00058 1166 Pfam TIR domain 16 186 IPR000157 GO:0007165
Vivi67g00058 1166 Gene3D - 12 187 IPR035897 -
Vivi67g00058 1166 ProSiteProfiles TIR domain profile. 15 180 IPR000157 GO:0007165
Vivi67g00058 1166 SUPERFAMILY L domain-like 536 906 - -
Vivi67g00058 1166 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 157 IPR035897 -
Vivi67g00058 1166 Gene3D - 193 340 IPR027417 -
Vivi67g00058 1166 PRINTS Disease resistance protein signature 214 229 - -
Vivi67g00058 1166 PRINTS Disease resistance protein signature 289 303 - -
Vivi67g00058 1166 PRINTS Disease resistance protein signature 383 397 - -
Vivi67g00058 1166 PRINTS Disease resistance protein signature 626 642 - -
Vivi67g00058 1166 SUPERFAMILY "Winged helix" DNA-binding domain 419 525 IPR036390 -
Vivi67g00058 1166 Gene3D Ribonuclease Inhibitor 782 904 IPR032675 -
Vivi67g00058 1166 Gene3D - 348 432 IPR042197 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi67g00058 15 847 WRKY Transcription Factor Family AT4G12020 31.678 1.74e-93 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi67g00058 - - psat:127076381 1706.42