LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi67g00055	ATGGAACTGTTGCTAATTTTGCTGCTATTTAAGGTGCATTTTGGACTCAGTGCTCAACAGGTTCATGAATATTCAGACTCCAACCTACTACATTTCAGATTCAGTGGTCATTTAAGTATTGCAGTGCCACCAACAGTATCATCTTATGTTCCTTCAAGTATTGCGCAACCACCTGCCAAGTCATTGTCGGGCGTTCCTGCAAGTATTGCATTTCCACCCTCCAAGTCAAATGTCAGAGCTCCTACAAAGAAACCGAAACATGGTTCTTTGGATTCTCCAATATCACATCATAAACATCACTATACCGGTAAAAAGAACCGTAATCCAACTCTAGGACCGACCTCCACAATCCAAGCTCCTGCTTACAGCAATCAAGGTCCTTCATACCTCAAACCACATCCTCCTTTCTCTTCACCAAACACCAAGTTTATCCAAGCACCTGTGCCTGCACCTGCACCATCACCGGCTTTTCGGTCAGGCCATCTAGATGTTCCGTCTCTTCCACCTAGAATTTCACCTATAGGTTCATCCTTGAACAAGATTAAGACTCCACCGCCAACATATGCATTGGTTCTTCCCCCTCCACCTCCTAATAAAGATTGCTTATCCGTCACTTGCTCAGAGCCGTTAACATACACACCTCCTGGTTCACCTTGTGGTTGTGTATGGCCTCTTCAAGTTAAAATCCGTGTCAGCATTGCAACATACAAGTGTTTTCCTCTGGTTTCAAAGCTAGCTTATGAAATTGCAGCGAGTGCTATGCTGAACCATACGCAAGTTCGTATCGTGGGAGCTGATGCAGCTAATCAACAACTAGAGAAAACCGATATTATCATTAACATGGTACCAAAAGGAGTAAAATTTGATGATACCGTGGCATTATTAATATACAAGAAATTCTGGCACAAGGAGATTCTAATAGATGGTTCCCTCTTTGGTGCTTATGAAGTACTCTATGTTCATTATCCAGGTCTTCCACCTTCACCACCTTCAAATCCCTCGGGTGTTTCTAGTATAGATGATGGACCGAATCAAGGTCGTGACAACAATGGAATGATGATGAAACCTTTAGGAGTAGCTATACCAAAGAAAAAGGAAGAAGGGAGCAACGGAAGAATGGTTTTTATAATTGCGCTGTCATCAGTTACCGCTTTTGTACTGTTCCTTGGACTTGCTTGGCTTTGTCTGTTGAAATACAGTTCTTGTATTCATCAACATGAAAAAGCTTCAGATAACTTAATGTCATCCTCTTCAAAACACTTAAGGGCAACCGGGCCATTAAATCATGGGATTGTGTCAGGATCTGGATCACGTTCCTTCGGTTCGGGAACAATAGCATTTACAAGATCTGCCAAGAATTTTTCCTTGATTGACTTAGAGAAAGCAACAAATAACTTTGACTCTTCTAGAATATTAGGAGAAGGTGGCTTTGGACTTGTTTACAAAGGTGTTCTGAATGATGGGAGGGATGTAGCAGTAAAGGTTCTCAAAAGAGATGATCAGCGTGGTGGCCGTGAATTCTTGGCAGAAGTTGAGATGCTTGGCCGCCTACACCATAGAAATTTAGTTAAACTGATAGGTATATGCATAGAGAAAAGGACTCGTTGCCTAGTGTATGAACTTGTCCCTAATGGAAGTGTGGAATCCCATTTGCATGGTGCTGACAAGGAAAGTGATCCATTGGATTGGAGCGCCCGGATGAAGATTGCTCTTGGTGCAGCTCGGGGATTGGCTTATCTGCATGAAGATTCCAATCCGTATGTCATACACCGGGACTTCAAGTCCAGTAACATCTTATTGGAACATGATTTTACACCCAAGGTTTCGGATTTTGGATTGGCTAGAACAGCACTGGAAGAGGGAAACAAGCACATCTCCACACATGTCATGGGTACATTCGGGTACTTGGCTCCTGAATACGCAATGACTGGCCATCTTCTCGTCAAAAGTGATGTTTATAGTTATGGAGTTGTGCTCCTTGAGCTCCTAACCGGTAGAAAGCCTGTTGATTTGTCACAACCGCCAGGTCAAGAAAATCTCGTGACTTGGGTCCGTCCACTTCTCACAAGTAACGAAGGTTTGCAAACAATCATAGACCCAGATGTAAAGCCAAATGTGTCTATCGATACAGTGGTAAAAGTTGCAGCAATTGCATCCATGTGCGTGCAACCAGAAGTATCTCAACGACCTTTCATGGGAGAAGTTGTTCAAGCCTTGCAGCTTGTATGCAGTGAGTTTGAGGAAACAAACTATATAAAATCAATTAACTTTCACGAAGACGATCTTGCAATAACTAAGTTGGAAGGGAAGTTTTTGGAGGTTTCAGACGAGAGAGTGGAGTTTTCGGAGTGTCAAAAATCACTTTATGGCTATCAATCTGGTGAAGAAAATGTAAGATTATCAGCTTCAGAGCTGCTTAGCACTTCAGGCCGGGAATTTGAGTCATTCAGGAGGAAATCAACTTCGGGGCCTATTACCACCGAGAAGAAAAGACATTTCTGGCAAAATTTGAGAGGTTTGTCTAAAGGTAGCACAAGCGATCATGGATTTTCAAATAAACTATGGCCTGGATCCCATTAA	2580	0.426	MELLLILLLFKVHFGLSAQQVHEYSDSNLLHFRFSGHLSIAVPPTVSSYVPSSIAQPPAKSLSGVPASIAFPPSKSNVRAPTKKPKHGSLDSPISHHKHHYTGKKNRNPTLGPTSTIQAPAYSNQGPSYLKPHPPFSSPNTKFIQAPVPAPAPSPAFRSGHLDVPSLPPRISPIGSSLNKIKTPPPTYALVLPPPPPNKDCLSVTCSEPLTYTPPGSPCGCVWPLQVKIRVSIATYKCFPLVSKLAYEIAASAMLNHTQVRIVGADAANQQLEKTDIIINMVPKGVKFDDTVALLIYKKFWHKEILIDGSLFGAYEVLYVHYPGLPPSPPSNPSGVSSIDDGPNQGRDNNGMMMKPLGVAIPKKKEEGSNGRMVFIIALSSVTAFVLFLGLAWLCLLKYSSCIHQHEKASDNLMSSSSKHLRATGPLNHGIVSGSGSRSFGSGTIAFTRSAKNFSLIDLEKATNNFDSSRILGEGGFGLVYKGVLNDGRDVAVKVLKRDDQRGGREFLAEVEMLGRLHHRNLVKLIGICIEKRTRCLVYELVPNGSVESHLHGADKESDPLDWSARMKIALGAARGLAYLHEDSNPYVIHRDFKSSNILLEHDFTPKVSDFGLARTALEEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVTWVRPLLTSNEGLQTIIDPDVKPNVSIDTVVKVAAIASMCVQPEVSQRPFMGEVVQALQLVCSEFEETNYIKSINFHEDDLAITKLEGKFLEVSDERVEFSECQKSLYGYQSGEENVRLSASELLSTSGREFESFRRKSTSGPITTEKKRHFWQNLRGLSKGSTSDHGFSNKLWPGSH	859

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi67g00055	859	MobiDBLite	consensus disorder prediction	839	859	-	-
	Vivi67g00055	859	SUPERFAMILY	Protein kinase-like (PK-like)	447	740	IPR011009	-
	Vivi67g00055	859	Gene3D	Phosphorylase Kinase; domain 1	443	541	-	-
	Vivi67g00055	859	MobiDBLite	consensus disorder prediction	73	114	-	-
	Vivi67g00055	859	MobiDBLite	consensus disorder prediction	330	353	-	-
	Vivi67g00055	859	ProSitePatterns	Protein kinases ATP-binding region signature.	472	494	IPR017441	GO:0005524
	Vivi67g00055	859	CDD	STKc_IRAK	472	740	-	-
	Vivi67g00055	859	PANTHER	OS01G0750732 PROTEIN	193	753	-	-
	Vivi67g00055	859	FunFam	receptor-like serine/threonine-protein kinase ALE2	439	541	-	-
	Vivi67g00055	859	Gene3D	Transferase(Phosphotransferase) domain 1	542	761	-	-
	Vivi67g00055	859	MobiDBLite	consensus disorder prediction	839	853	-	-
	Vivi67g00055	859	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	588	600	IPR008271	GO:0004672\|GO:0006468
	Vivi67g00055	859	FunFam	Receptor-like serine/threonine-protein kinase ALE2	542	757	-	-
	Vivi67g00055	859	Pfam	Protein tyrosine and serine/threonine kinase	469	739	IPR001245	GO:0004672\|GO:0006468
	Vivi67g00055	859	ProSiteProfiles	Protein kinase domain profile.	466	742	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi67g00055	198	849	Receptor kinase-like Gene Family	AT5G56890	58.021	0.0	742

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_Extensin	Vivi67g00055		PK_Tyr_Ser-Thr	1.3e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi67g00055	-		-	gmx:100814040	1239.94