Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi67g00044 ATGGAGGAAACGCCCACACTCCTTCATGGAACAATTGAAGCTACCATCTTTAAGGCCTCACCTTACACACCATTTCCCCTCTTCAACTGCATATGTACAAATGGAAAGCCTGCATATGTGACCATCAAGATAGACAACAAAAAGGTTGCGAAAACAAGCAAAGAAAGAAACCGTATTTGGAACCAAACCTTTCACATTCAATGTGCTCATCCAGCTGATTCAGTTATCACCATTACATTGAAAACATCAAATTCCAAGTTAGGAAAATACAGTATCAAGGCCCAACAACTTTTAAATGAAGCAAGTATAATCAACGGATTCTTCCCTCTCCTCGCGGAAAATGAAAAACCAAACCTGAAACTTAAGTTGAAGTTTATATTATGGTTCAAGCCTGCAAAATTGGAAGAGAGTTTGGAAAAGGTACTAAGCAATGAGGAATTTCAAGGGCTAAAGGATGCAAAATTTCCACAAAGGTCTAATTGTCAAGTCAAACTTTTTCATGATGCTCATCATTCTCCTACCTTTCAACCTCCCTTTGATCCATGTGGTACTCCAAACAATCTATGGGAGGATATCTATAACGCCATTGAAGGTGCAAAGCATATAGTTTATATTGCAGCTTGGTCTCTCAATCCCAATATAGTTTTGGTAAGAGATCCTCATACAAAAATCCAACATGCAAGAGGAATGAGTTTAGGTGAGCTGTTGAAAAAGAAGGCAGATGAAGGAGTGGCTGTGAGAGTTATGCTTTGGGATGATGAAACATCATTGGCCTTAGTTAAGAACAAAGGTGTAATGAAAACACAAGATGAGGATGCTCTTACTTATTTCAATCACACACAAGTAATTTGCGAAAAGTGTCCTAGATTACACCACAAGTTTCCAACACTATTTGCTCACAATCAGAACACTATAACAGTTGACATAAAAGTGGCTAAATCGGTTAGCGATAGAGAGATTATGAGCTTTGTTGGTGGTTTAGATTTGTGTGATGGTAGATATGATACAGAACAGCATTCATTGTTTCAAACACTCATTAACGAATCACATTGTTATGACTTTTACCAACCAAACATTGAAGGAGCTAGCCTTAACAAAGGAGGACCAAGAGTTCCTTGGCATGATGCTCATGCTTGTGTTATCGGTGAAGCTGCCTGGGATGTGTTGACAAATTTTGAGCAAAGATGGACTGAGCAATGTGATCCTTCTCTTCTAGTCCCTACTATCACCTTAGTAAATCTCATGCCTCGAAGAAACTCAAACACTTCGATAGAAAGTAACTGGAAAGTTCAAGTTTATAGGTCGATTGATCACGCTTCTGTTGGTGATTTCTGTGGAAATTTCACTGCGGAGAAGAGTATCCATGATGCTTATGTTGAAGCAATTAGGCATGCTGAAAGGTTTATATACATTGAAAACGAATACTTCATTGGTGGAGGCCAATGGTGGGGAAAAGATAAGCATTGCGGTTGCACGAATCTAATTCCAATTGAAATTGCACTGAAAGTGATAAGTAAGATCAAAGCAAAGGAGAGATTTGCAGTGTATATAGTTATACCTATGTGGCCAGAAGGAGTGCCTGAAAGTGAATATGTTCAAGATATATTGTATTGGACTAGAGAAACTGTGACAATGATGTATAGGTTGATTGGTGAAGCAATAAAAGGAAGTGGTGAAATAGGACATCCAAGAGATTATTTGAATTTCTTTTGTCTTGCAAATAGAGAGAATAAGGGAAAAGGGGAGTATCTTCCACTGGATTCTCCCCATCCTGAAACACAATACTGGCATGCACAAAAGAATAGAAGATTCATGGTTTATGTACATTCAAAGCTCATGATAGTGGATGACATGTACATACTACTAGGTTCAGCTAATATGAATCAAAGATCCATGGATGGGAAAAGGGACACAGAGATTGCCATAGGATGCTTCCAATCTCAAGATGAGGTTAAGAAACAAATGAACCTTGGTGATGTTCATGCATACAGAATGTCTTTATGGTATGAGCACACAAATAGTTTCAATGAATTGTTCTTGGAGCCACAAAGTTTGGAATGTGTGAAGAGGATGTGTTCCATTGGAGATCAAATGTGGGAAATCTACAGCAATGAAGAAATTGTAGACATGGAAGGTGTGCACCTTGTTACTTACCCAATGAGAGTAACACAAGAAGGGTATGTGAAAGACTTGAGTAATGGAGTTTATTTTCCTGATACAAACTCTCTAGTGAAGGGGAAGAGATCTACATTGCCCCCTAATGTTATGGCACCACCAAATGATGAAATTCATGAAGAGATACTTGAAGGCCTAAATGAAGAGGAAGAGGAAAATCCGCTCCCTAAACCAAGGGCTAAGAGAAACACTAACAGGCCCAAACATTTTGAGAATTATGTGATGCCAAAATGTAAGAAAGGGGGTAGGAAGTAG 2430 0.3864 MEETPTLLHGTIEATIFKASPYTPFPLFNCICTNGKPAYVTIKIDNKKVAKTSKERNRIWNQTFHIQCAHPADSVITITLKTSNSKLGKYSIKAQQLLNEASIINGFFPLLAENEKPNLKLKLKFILWFKPAKLEESLEKVLSNEEFQGLKDAKFPQRSNCQVKLFHDAHHSPTFQPPFDPCGTPNNLWEDIYNAIEGAKHIVYIAAWSLNPNIVLVRDPHTKIQHARGMSLGELLKKKADEGVAVRVMLWDDETSLALVKNKGVMKTQDEDALTYFNHTQVICEKCPRLHHKFPTLFAHNQNTITVDIKVAKSVSDREIMSFVGGLDLCDGRYDTEQHSLFQTLINESHCYDFYQPNIEGASLNKGGPRVPWHDAHACVIGEAAWDVLTNFEQRWTEQCDPSLLVPTITLVNLMPRRNSNTSIESNWKVQVYRSIDHASVGDFCGNFTAEKSIHDAYVEAIRHAERFIYIENEYFIGGGQWWGKDKHCGCTNLIPIEIALKVISKIKAKERFAVYIVIPMWPEGVPESEYVQDILYWTRETVTMMYRLIGEAIKGSGEIGHPRDYLNFFCLANRENKGKGEYLPLDSPHPETQYWHAQKNRRFMVYVHSKLMIVDDMYILLGSANMNQRSMDGKRDTEIAIGCFQSQDEVKKQMNLGDVHAYRMSLWYEHTNSFNELFLEPQSLECVKRMCSIGDQMWEIYSNEEIVDMEGVHLVTYPMRVTQEGYVKDLSNGVYFPDTNSLVKGKRSTLPPNVMAPPNDEIHEEILEGLNEEEEENPLPKPRAKRNTNRPKHFENYVMPKCKKGGRK 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi67g00044 809 Pfam Phospholipase D Active site motif 607 631 IPR001736 GO:0003824
Vivi67g00044 809 Gene3D Endonuclease Chain A 446 657 - -
Vivi67g00044 809 Pfam Phospholipase D C terminal 677 747 IPR024632 -
Vivi67g00044 809 Gene3D Endonuclease Chain A 174 423 - -
Vivi67g00044 809 ProSiteProfiles C2 domain profile. 1 121 IPR000008 -
Vivi67g00044 809 PIRSF PLD_plant 3 757 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Vivi67g00044 809 Gene3D C2 domain 32 129 IPR035892 -
Vivi67g00044 809 Pfam C2 domain 38 109 IPR000008 -
Vivi67g00044 809 SUPERFAMILY Phospholipase D/nuclease 152 406 - -
Vivi67g00044 809 SUPERFAMILY Phospholipase D/nuclease 425 688 - -
Vivi67g00044 809 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 124 IPR035892 -
Vivi67g00044 809 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 604 631 IPR001736 GO:0003824
Vivi67g00044 809 PANTHER PHOSPHOLIPASE D 6 740 IPR015679 -
Vivi67g00044 809 SMART pld_4 604 631 IPR001736 GO:0003824
Vivi67g00044 809 SMART pld_4 296 333 IPR001736 GO:0003824
Vivi67g00044 809 MobiDBLite consensus disorder prediction 765 809 - -
Vivi67g00044 809 MobiDBLite consensus disorder prediction 775 803 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi67g00044 30 757 Phospholipase D Gene Family (Wang group) AT1G55180 60.352 0.0 913
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi67g00044 K01115 - gmx:100812642 1222.99