Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi67g00040 ATGAGTCGAGAGCAGGCGAAGAGGGGGAAGCAAGAGAAAAGTTGTGATGGTGCTGAGAAGGTTATTGTTGCTGTTAAGGCGTCGAAGGAAATTCCAAAGACTGCTCTTGTTTGGTCCTTGACTCATGTTGTTCAACCTGGTGATTGCATTACGCTGCTTGTTGTTGTTCCTTCCCAAAGTTCAGGTAGAAAATGGGGTTTTCCTAGATTTGCTGGTGACTGTGCCAGTGGTATGAAGAAGTATCCTCCAGGAACAGTTTTAGAGCAGAAGAGTGATATCACTGATTCTTGCTCTCAGATGATCCTTCAGCTCCATGATGTCTATGATCCAAATAAGATAAATGTCAGGATTAAAATTATTTCTGGATCGCCTTGTGGATCAGTGGCCGCAGAAGCCAAGAAAGGACAAGCTAGTTGGGTTGTTTTAGACAAACATCTCAAACATGAGGAAAAGAGATGCATGGAAGAGTTGCAGTGTAACATTGTTGTTATGAAGCGTACTCAACCGAAAGTGCTTCGTTTGAACTTGATTGGAGCACAAAAGAAGGAAGTTGAAGAAGCTGGTACATCACCTTCTGAGCAAGGTGATACACCTGAAAAGCAATCTGAAAACAAGTTGGATTCTTTAGTAGATTCTATTAAAGGACCGAATGTTACTCCAACTAGCAGCCCTGAGCTAGGGACGCCATTCACCACTACTACTGAAGCCGGTACTTCATCAGCTTCAAGCTCTGATCCCGGAACATCACCATTCTGTATCCCAGAGATGAATGGTGAGAAAAAGAAAGAAGAAACCATTAAGGAAAGTCATGAACTTTGTGATACATCAGACACAGAAAGTGAAAGTCTGTCGACATCTTCAGCTAGCTTTAGATACCAACCGTGGATCACAGAATTGCTTTTACATCAACAATCATCTCAACGCAACGGAGAAAGATCAGATGCGTATCATGGTATGCCTCAAGCAACTACAACCAAAGCTTTGTTAGAAAAGTATTCTAGGCTTGATAGAGGAGCTGGAATGGAAATGTCGGCAGCATATAGAAATGACTCGGATTTTAGTGGTAATTTAAGAGAAGCAATAGCATTACCAGGAAATGCTCCACTTGGTCCACCTCCTTTGTGTTCAATATGTCAACACAAGGCACCTGTTTTTGGAAAACCTCCAAGGTGGTTCAGCTATGCTGAGTTGGAACTTGCTACCGGTGGATTTTCACAAGCCAACTTCTTAGCAGAAGGAGGGTATGGATCGGTTCATCGAGGGGTTCTACCAGAAGGACAAGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAAGGTGATGTCGAATTTTGCTCTGAGGTAGAAGTTCTAAGCTGTGCTCAACACCGAAATGTTGTTATGCTGATTGGATTCTGTATAGAGGATAAGAGAAGGCTTCTGGTTTATGAGTACATATGCAATGGATCATTGGATTCACATTTATATGGGCGACAAAGGGATCCATTAGAATGGTCTGCGAGGCAGAAAATTGCTGTTGGAGCTGCCCGCGGGTTAAGGTATCTTCACGAAGAGTGCAGAGTTGGTTGTATCATCCACCGTGACATGAGGCCGAACAACATTCTCATAACTCATGATTTTGAACCTCTGGTTGGTGATTTTGGATTGGCAAGGTGGCAACCTGATGGAGACATGGGTGTAGATACTAGAGTAATTGGAACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGCGGTCAAATCACCGAAAAAGCTGATGTTTATTCCTTTGGGGTGGTATTGGTGGAGCTTGTTACCGGTAGAAAAGCTGTCGATCTCACTCGGCCAAAGGGACAACAGTGCCTTACTGAGTGGGCGCGGCCACTGTTAGAAGAATATGCCATTGACGAACTGATTGACCCGAGGCTTGGACGTCTCTATTTAGAGCATGAGGTCTATTGCATGTTGCATGCCGCTTCATTGTGCATAAGGAGAGATCCTCATTCTAGACCCCGCATGTCACAGGTTCTCCGAATTCTAGAGGGAGACATGGTGATGGACACAAATTACATTTCTACTCCAGGCTATGATGTTGGAAACAGGAGCGGTCGCATTTGGTCAGAGCCACTGCAGAGACAGCATCATTACAGTGGTCCCCTAGTAGAAGATTCATTGGAGTCATCATTCAGTGGAAAGCTATCTATTGACAAGTACAAACCTTCCTATTGGGATAGGAGTAGGGACAAGCCCATAAGGGCCTCATCAGAAGATGATATTTGA 2262 0.4385 MSREQAKRGKQEKSCDGAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVVPSQSSGRKWGFPRFAGDCASGMKKYPPGTVLEQKSDITDSCSQMILQLHDVYDPNKINVRIKIISGSPCGSVAAEAKKGQASWVVLDKHLKHEEKRCMEELQCNIVVMKRTQPKVLRLNLIGAQKKEVEEAGTSPSEQGDTPEKQSENKLDSLVDSIKGPNVTPTSSPELGTPFTTTTEAGTSSASSSDPGTSPFCIPEMNGEKKKEETIKESHELCDTSDTESESLSTSSASFRYQPWITELLLHQQSSQRNGERSDAYHGMPQATTTKALLEKYSRLDRGAGMEMSAAYRNDSDFSGNLREAIALPGNAPLGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGYGSVHRGVLPEGQVIAVKQHKLASSQGDVEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQRDPLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDMGVDTRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLTEWARPLLEEYAIDELIDPRLGRLYLEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDMVMDTNYISTPGYDVGNRSGRIWSEPLQRQHHYSGPLVEDSLESSFSGKLSIDKYKPSYWDRSRDKPIRASSEDDI 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi67g00040 753 MobiDBLite consensus disorder prediction 182 285 - -
Vivi67g00040 753 ProSitePatterns Tyrosine protein kinases specific active-site signature. 525 537 IPR008266 GO:0004672|GO:0006468
Vivi67g00040 753 Gene3D Phosphorylase Kinase; domain 1 376 479 - -
Vivi67g00040 753 MobiDBLite consensus disorder prediction 214 250 - -
Vivi67g00040 753 PANTHER OS01G0750732 PROTEIN 272 687 - -
Vivi67g00040 753 MobiDBLite consensus disorder prediction 256 277 - -
Vivi67g00040 753 SUPERFAMILY Protein kinase-like (PK-like) 388 683 IPR011009 -
Vivi67g00040 753 Gene3D HUPs 5 165 IPR014729 -
Vivi67g00040 753 ProSiteProfiles Protein kinase domain profile. 404 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi67g00040 753 Pfam Protein tyrosine and serine/threonine kinase 408 672 IPR001245 GO:0004672|GO:0006468
Vivi67g00040 753 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 480 683 - -
Vivi67g00040 753 CDD STKc_IRAK 410 676 - -
Vivi67g00040 753 Gene3D Transferase(Phosphotransferase) domain 1 480 686 - -
Vivi67g00040 753 FunFam Dual-specific kinase DSK1-like 12 165 - -
Vivi67g00040 753 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 376 479 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi67g00040 343 670 Trihelix Transcription Factor Family AT1G68690 49.699 7.36e-101 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Vivi67g00040 PK_Tyr_Ser-Thr 7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi67g00040 - - cam:101503019 1336.24