Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi67g00038 ATGGCACACTTTTTGAGCTCACAAGGTGTACTTTCATGGATTTGTGAAGGAGAAACCAACTTGTTATCTTTCTGTTTTCAAAGAAGCATAATTGATGGAATGAACATCATCTTCTTCTGTGTTTTCTATCTCTTTATGCTCATAAGTTTAATTAGAAAGTATCATTCAAACTCAAACCATCATGAAAACAATCAAAAGGATCGCATTATGGTGGTTGCATCAATCTGTTGTTTTCTTACTTGCATCATGTATTTAGGCACTGTTTTGTATGATTTCATCGATCGAGACGGAGAAGTTGATCATTTGAGTTGGATTATTAGAGGACTAACTTGGACCTCTTTTGCTGTTTCACTTCTCACTCAGAATAGTAAATGGATCTTGTGTCTAACTTCTGTTTGGTGGATTTGTTTGTGTGTGTTACTTTCTATTCTCAACATTGAAGCTCTTATGATAAATCATACTATTCCTCTCTTTGATTTGATTCCATGGCTTGTAAGTTTCCTTCTTCTCCATTGTGCTTTCAGAAACTATAGTTACTTCAATTCAGCGCGTTATCGAAAGAAAACCATGCTTGAAGAATCTTTGTTATGTGAATCTGAAAAGGAAAGTATAATTCAACCACAAACTGGACTAAACCAAGCCAATTTCTTAAACAGGTTCACATTTTCTTGGCTTAATCCTTTACTGTCTTTAGGTTATGAAAAGCTATTAGTCCTTCAAGACATTCCTTCTTTGCCTAATGAAGATAAAGCTAACAGTTGTTACCAAAAATTTGTTAGCACAAGAGATTCTTTGTTGAGAAGAAGTGGTTCAAGCTCAAACATTTCAAAGAATTTGCTTATTTTGACAATGTCAAGAGCTTTTTTGAAAGAGAATATTTATATAGCAATATATGCATTAGTTAGGACTATTTCTGCAGCTGTTGGTCCATTGTTGGTTTATGCTTTTGTAAGCCACGCGAGCCGTGAACTCAGTGAAGACGAGTACTTTTACGAAGGTCTTACTTTATTAGCGTGCCTTGTGTTTGTTAAATTTCTTGAGACAGTTTCTGAAAGACAATGGTACTTTGAATCGAGAAGGTCGGGAATGAGAATGAGATCAGCATTAGTGGTTGCAGTGTATGAGAAGCTATTGAATCTTTCGAGTTTCGGAAGGAAAAGACACTCAAATGGGGAGATTGTGAATTACATAGCAGTTGATGCATACAGAATGGGAGAGTTTTTGTATTGGTTTCATTCAGGATGGTGCTTTGTGTTGCAAATTTTGTTATCTGTTTGTGTACTTTTTTGGGTTGTTGGTCTTAGTGCAATTCCTGGTTTGATTCTTCTTATCATATTTGGAGTATTTTTCAATGTTCCATATGCAAAGAAGATAAAAAATTGTAAGTCAGAAGTCCTTAAATCACAGGATGAAAGACTAAGGTTAACTTCTGAGATTCTTAACAACATCAAAATTATTAAATTACAAGCTTGGGAGGATAAGTTTATGAACATGATAGAGTCGATTCGCGATACCGAGTTCAAATGGTTGGCTCAGACACAGTTCACAAAGGCTTTCGGAGCTATTCTATATGTCTCTCCATCAATTATTGGCGCAGTGGTTTTAATAGCATGCTACCTCTTTAATACTGCGCCATTAAATGCTGCGACTATCTTCACTGTTCTTGCTACTCTGAAAAGTGTGGCAGAGCCAGTGAGGTTTATACCTGAGGCTGTTTCTGTCATTATCCAAGTTAAAGTGTCTTTTGATAGGCTCAACAGTTTTCTCCTTGATAATCAGACAAAAATTGGCTACCAAAAGAAGAACATTTATGTTTCAAAAACTGGTAACTGTATTGAAATACAGGAAAGTGATTTCAGTTGGGATGAGGATTCAGTGAAACCTACTTTGAGAGAAATCAATTTAGTCATCAAACATGGCGAAAAAGTAGCAGTTTGTGGACCAGTTGGAGCTGGCAAGTCTTCTTTGCTCCATGCTATCCTTGGAGAAATGCCTAAAATTTGTGGAACTGTTAAAATGCATGGAGAGGTAGCCTATGTTTCTCAAAATTCATGGATACAAAGTGGAACAATTCGTGATAACATACTCTTTGGAAAACCAATGGAAAGAAATAGATATGAGAGTGCAATAAAAGCATGTGCTCTGGACAAGGATATAGATGGTTTTAGCCATGGTGATCTTACAGAAATAGGGCAGAGAGGACTTAACTTGAGTGGAGGACAAAAGCAAAGGATTCAACTGGCTAGAGCAGTCTACAATGATGCTGATGTATATCTCCTTGATGACCCTTTTAGTGCTGTAGATGCACACACTGCTTCAATTCTATTCCATGATTGTGTCATGAATGCTCTCAAAAAGAAGACAGTCATCCTAGTGACACATCAAGTAGAGTTTCTGTCAGAAGTCGATAAAATTCTGGTTATGGAGGGTGGAGTTATTACTCAAGCAGGAAGCCATGAGGAGTTGTTGACATCAGGAACAACTTTTGAACAACTTATGAATGCTCATAGAGACGCAATAGCTGTAATAGGTACTACAAATAGTCAAAACCAAGAAATGTTTCAAGAAACAGATGAAGTTGATGGTCCTGTTATGATAAACAACAATGAAGAAATATGTGAGACAAGTATTGGATGTCCGCAGCTTACTGAAGAAGAATACATAGAAATCGGAACTTCTGGATGGGAACTGTATCTGGATTATATTATAATCTCAAAGGGAATGTTTCTTCAGTTTTTAAGCTTAATAGCTCTGATAGGTTTTACTGTTTGTTCAACTGGTGCATCTTATTGGATTGCTGTATCAAGTGAAATTTCAAGCATCGATAAAGGATTGATGGTCGTTGTTTACACTGGAATGTCAATTTTAAGTGCTGTTTTTGCTTACTTGAGGTCTATATTGGTAGTTCATCTTGGACTAAAGGCTTCTAAAGCATTCTTCTCGGGTTTCACTTCTTCCATTTTCAATGCTCCTATGTCATTCTTCGATTCAACTCCTGTTGGAAGAATTTTAACTCGAGCGTCGTCAGATTTTGATACTTTGGATTTTGACGTGCCTTTTGCTGCAGTGTATGTAGCACAAAGCGCCGTTGTTGTTCTAACAGGAATTGCGATCATGACTTCTGTCACATGGCAAATTCTTATAGTTGCCATTATAACTGCAGTAACAGGATACTATATTAAGGAATACTATCAAGCGACTGCAAGGGAGCTAGTAAGAATTAACGGAACGACAAAAGCTCCCGTTGTGAGTTTTACAACTGAGACATCAGCAGGAGTGGTCACAGTAAGAGCTTTCAAGATGGTGGACAGATTCTTCAAAAACTTCTTACATATAGTTGACACAGATGCTGCACTGTTCTTGCATACCAATGCTGCCTTAGAGTGGTTACAGTATAGAGTTGACATACTTCAAAATGTGATCCTTTTTACAGCAGCTTGTCTATTTGTGTTTCTTCCAATGGGATCAATCGCTCCAGGTCTTGTGGGACTTTCGCTCTCTTATGCTTTGTCATTGACAAGATCTCAGATGTATTATAACACATGGTCTTGTAACATGTCAAATTTCATCATCTCTGTGGAAAGAATCAAGCAATTCATGCAGATACCACAAGAGCCTCCAAAAATAATGGAGTATAATAGACCACCATCTTCATGGCCTTCAAAGGGAAGGATAGAGTTTCATGATTTGATGATTCGGTATCGTCCAAATGCTCCACTAGTACTAAATGGAATCACATGTACTTTCAAAGAAGGAACTAGAGTAGGAGTTGTGGGAAGAACTGGGAGTGGCAAAACAACACTTCTAAGCGCATTATTTCGTTTGGTGGAACCTACATATGGCGAAATACTAATAGATGGACTTAACATACGCTCAATCGGACTCAAGGATTTAAGAATGAAGTTAAGCATCATCCCTCAAGAACCAATTCTTTTCAGGGGTAGTGTCCGAACCAACTTGGATCCACTAGACCAATTCTCAGATGATGAAATATGGAAGGTTTTAGAAATGTGTCAACTCAAAGAGTTTTTATCAGGATTACCACATCTTTTGGACTCATCAGTGAGTAATGAAGGAGAAAATTGGAGCATGGGCCAAAGACAGCTGTTTTGCCTTGGAAGGGTCCTTCTGAAAAGGAATAGAATTCTAGTTTTGGATGAAGCTACAGCTTCTATTGATTCTACCACAGATGCCATTCTACAAAAAATAATCAGACAAGAATTTGCAGAGTGCACAGTTATAACTGTGGCTCACAGAGTTCCAACTGTCATAGACAGTGACATGGTCATGGTTCTATCTTATGGAAAACTGGTGGAATATGATGAACCTTCAAAACTGATGGAAGACAATTCTTCTTCATTCTCCAAGCTTGTGGCTGAATACTGGTCCAGCTGCATGGGGAACTCATAA 4410 0.3757 MAHFLSSQGVLSWICEGETNLLSFCFQRSIIDGMNIIFFCVFYLFMLISLIRKYHSNSNHHENNQKDRIMVVASICCFLTCIMYLGTVLYDFIDRDGEVDHLSWIIRGLTWTSFAVSLLTQNSKWILCLTSVWWICLCVLLSILNIEALMINHTIPLFDLIPWLVSFLLLHCAFRNYSYFNSARYRKKTMLEESLLCESEKESIIQPQTGLNQANFLNRFTFSWLNPLLSLGYEKLLVLQDIPSLPNEDKANSCYQKFVSTRDSLLRRSGSSSNISKNLLILTMSRAFLKENIYIAIYALVRTISAAVGPLLVYAFVSHASRELSEDEYFYEGLTLLACLVFVKFLETVSERQWYFESRRSGMRMRSALVVAVYEKLLNLSSFGRKRHSNGEIVNYIAVDAYRMGEFLYWFHSGWCFVLQILLSVCVLFWVVGLSAIPGLILLIIFGVFFNVPYAKKIKNCKSEVLKSQDERLRLTSEILNNIKIIKLQAWEDKFMNMIESIRDTEFKWLAQTQFTKAFGAILYVSPSIIGAVVLIACYLFNTAPLNAATIFTVLATLKSVAEPVRFIPEAVSVIIQVKVSFDRLNSFLLDNQTKIGYQKKNIYVSKTGNCIEIQESDFSWDEDSVKPTLREINLVIKHGEKVAVCGPVGAGKSSLLHAILGEMPKICGTVKMHGEVAYVSQNSWIQSGTIRDNILFGKPMERNRYESAIKACALDKDIDGFSHGDLTEIGQRGLNLSGGQKQRIQLARAVYNDADVYLLDDPFSAVDAHTASILFHDCVMNALKKKTVILVTHQVEFLSEVDKILVMEGGVITQAGSHEELLTSGTTFEQLMNAHRDAIAVIGTTNSQNQEMFQETDEVDGPVMINNNEEICETSIGCPQLTEEEYIEIGTSGWELYLDYIIISKGMFLQFLSLIALIGFTVCSTGASYWIAVSSEISSIDKGLMVVVYTGMSILSAVFAYLRSILVVHLGLKASKAFFSGFTSSIFNAPMSFFDSTPVGRILTRASSDFDTLDFDVPFAAVYVAQSAVVVLTGIAIMTSVTWQILIVAIITAVTGYYIKEYYQATARELVRINGTTKAPVVSFTTETSAGVVTVRAFKMVDRFFKNFLHIVDTDAALFLHTNAALEWLQYRVDILQNVILFTAACLFVFLPMGSIAPGLVGLSLSYALSLTRSQMYYNTWSCNMSNFIISVERIKQFMQIPQEPPKIMEYNRPPSSWPSKGRIEFHDLMIRYRPNAPLVLNGITCTFKEGTRVGVVGRTGSGKTTLLSALFRLVEPTYGEILIDGLNIRSIGLKDLRMKLSIIPQEPILFRGSVRTNLDPLDQFSDDEIWKVLEMCQLKEFLSGLPHLLDSSVSNEGENWSMGQRQLFCLGRVLLKRNRILVLDEATASIDSTTDAILQKIIRQEFAECTVITVAHRVPTVIDSDMVMVLSYGKLVEYDEPSKLMEDNSSSFSKLVAEYWSSCMGNS 1469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi67g00038 1469 Pfam ABC transporter 1242 1390 IPR003439 GO:0005524
Vivi67g00038 1469 SMART AAA_5 1251 1443 IPR003593 GO:0016887
Vivi67g00038 1469 SMART AAA_5 639 812 IPR003593 GO:0016887
Vivi67g00038 1469 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 912 1175 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi67g00038 1469 FunFam Multidrug resistance protein associated1 590 855 - -
Vivi67g00038 1469 CDD ABC_6TM_ABCC_D1 294 585 IPR044746 GO:0140359
Vivi67g00038 1469 Pfam ABC transporter 630 764 IPR003439 GO:0005524
Vivi67g00038 1469 CDD ABC_6TM_ABCC_D2 908 1200 IPR044726 GO:0140359
Vivi67g00038 1469 Gene3D ABC transporter type 1, transmembrane domain 273 593 IPR036640 GO:0005524|GO:0016020
Vivi67g00038 1469 Gene3D ABC transporter type 1, transmembrane domain 881 1206 IPR036640 GO:0005524|GO:0016020
Vivi67g00038 1469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1216 1451 IPR027417 -
Vivi67g00038 1469 CDD ABCC_MRP_domain2 1223 1443 - -
Vivi67g00038 1469 SUPERFAMILY ABC transporter transmembrane region 910 1207 IPR036640 GO:0005524|GO:0016020
Vivi67g00038 1469 SUPERFAMILY ABC transporter transmembrane region 284 585 IPR036640 GO:0005524|GO:0016020
Vivi67g00038 1469 ProSitePatterns ABC transporters family signature. 737 751 IPR017871 GO:0005524|GO:0016887
Vivi67g00038 1469 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 614 835 IPR003439 GO:0005524
Vivi67g00038 1469 FunFam ABC transporter C family member 5 876 1206 - -
Vivi67g00038 1469 FunFam ABC transporter C family member 3 1208 1460 - -
Vivi67g00038 1469 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1225 1459 IPR003439 GO:0005524
Vivi67g00038 1469 CDD ABCC_MRP_domain1 612 811 - -
Vivi67g00038 1469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 602 835 IPR027417 -
Vivi67g00038 1469 Gene3D - 607 841 IPR027417 -
Vivi67g00038 1469 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 212 1458 - -
Vivi67g00038 1469 FunFam ABC transporter C family member 10 276 593 - -
Vivi67g00038 1469 Gene3D - 1208 1460 IPR027417 -
Vivi67g00038 1469 Pfam ABC transporter transmembrane region 912 1172 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi67g00038 1469 Pfam ABC transporter transmembrane region 294 556 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi67g00038 1469 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 295 577 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi67g00038 612 869 Calmodulin-binding Proteins AT2G36910 25.899 6.05e-23 104