Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi67g00034 ATGTCTTACTTAGGTGAAATTTCTGAGCCATTGCTACCTCAAAAAGTTGAAACAAAACAAACAGAACTAAGGCATGCTACTTTTCTCAGCAAATTGATTTTCTCTTGGATTAATTCTTTACTCACTTTAGGTTACTCAAAGCCACTAGATCTTCAAGACATTCCTTCCCTTGTTTCTGAAGATGAGGCTAACATAGCCTATCAAAAATTTGTTCATGCTTGGGAATCACTTGTTAGAGAGAGGACTAAGAACAATGCAAAGAGTTTGGTTCTTTGGTCTATAGGTAGAACTTTCTTAAAAGAAAACATATTAATAGCATTTTATGCATTAATCAGAACTATATCTGTTGCAGTTTCCCCTCTAATACTCTATGCTTTTGTTAACTACTCAAATAGAACTGAGGCAGATCTTAGAAAAGGTCTTTCCATAGTTGGTATTTTGATTTTCACCAAAGTCTTTGAGTCTTTGTCTCAAAGACATTGGTTTTTTAACTCAAGGAGGTCAGGAATGAAAATGAGATCAGCTCTGATGGTGGCAGTTTATCAAAAGCAGCTCAAGCTTTCTAGCTCCGCAAGGACGAGACACTCGGCCGGCGAAATTGTGAATTACATTGCAGTTGATGCTTATAGAATGGGAGAATTTCCATGGTGGTTTCATCTAACATGGACTTGTGCATTGCAGCTTGTTCTTTCCATTGTTATCCTTTTTGGTGTTGTAGGTATTGGTGCTATTCCTGGTTTAGTCCCTCTTCTTATATGTGGACTTCTCAATGTACCATTTGCAAGGATCCTGCAAAATTGTCAGTCACAGTTTATGATGGCACAGGACAAACGTCTTCGATCCACTTCGGAGATTCTAAATAGTATGAAGATCATTAAGTTACAATCATGGGAGGAAAAATTCAAGAAATTAGTCGATTCGTTACGCGATAAAGAGTTTGTATGGTTGTCTAAGGCACAGAAACTGAAAGCTTTTGGATCATTTCTTTATTGGATGTCTCCTACAATGATATCTGCTGTTGTTTTCCTCGGATGCGCAATTTCCAAGAGTGCACCATTGAATGCTGAAACTATTTTCACAGTTCTTGCAACATTGAGGAACATGGCAGAACCTGTTAGAATGATCCCTGAGGCTCTATCCATTATGATTCAAGTTAAGGTTTCCTTCGACCGTCTCAATAACTTTTTGCTTGAAGAAGAACTAAACGCAGATGATAGTGAAAGAAACTTCAAGCAATGTTCGGGTAATGCTGTGGAAATTCAAGATGGCAACTTCATTTGGGATCATGAATCAGTGTCTCCAACCTTAACACATGTGAATTTAGAAATCAAACGGGGACAAAAAATAGCAGTTTGTGGACCAGTTGGTGCTGGAAAATCATCACTTTTGTATGCAATACTTGGAGAGATTTCCAAGATTTCAGGAACTGTTAATGTAGGTGGCAATCTTGCCTATGTTTCTCAATCTTCATGGATACAAAGTGGAACAGTTCAAGATAATATACTCTTTGGCAAGCCAATGGACAAAACAAGATATGAGAAAGCAATTACAGCCTGTGCTTTAGATAAGGATATCAATGATTTTAGCCATGGTGATCTTACAGAAATTGGTCAGAGAGGGATTAACATGAGTGGAGGACAAAAGCAAAGGATTCAACTAGCTAGAGCAGTCTACAATGATGCAGATATCTATCTTCTCGATGATCCTTTCAGTGCAGTTGACGCACATACAGCTGCAATACTATTCAATGACTGTGTCATGACTGCTTTAGGAGCGAAAACGGTCATTCTAGTTACTCATCAAGTGGAATTTCTATCAGAAGTTGATACTATCTTGGTAATGGAGAGTGGAAAAGTTATTCAATCAGGTTGTTATGAAAATCTCTTGACGGCTGGAACAGCCTTTGAACTACTTGTGAGTGCTCATAAAGACACAATCGCTGAGTTGAATCAAGATAATGAAAATAAAAGAGATTATGAAAATGAGGTTTCGTCTAATCCTCAAGACTCTCTAGGTTTTCATCTCACTAAAGATCCAAATGAGGGAGATAGTTCTAGTATCAAGGGTCCAATTGGTGTACAACTTACACAAGAGGAAGAAAAAGTAACTGGTGATGCTGGATGGAAGCCATTTTGGGATTATATCAATTATTCCAAAGGGTCATTCATGCTATGTTTGATAGTGTTAGCACAGTCTGTTTTTATAGCTTTGCAAACTGCATCCACCTTTTGGCTTGCTATAGCCATTAAAATTCCAAAAGTAACTAATGCCACCTTGATTGGAGTTTATGCATCAATTTCTTTTGCTAGTTCTGCTTTTATTTATGTAAGAACTTACTTGACTGCGCTTTTGGGATTAAAAGCTTCTACTGTTTTCTTCTCAAGCTTCACCACAGCTATCTTCAATGCTCCAATGCTTTTCTTTGATTCAACTCCTGTAGGAAGGATTTTAACTAGAGCTTCGTCAGATTTGAGTATTATGGACTTCGATATACCTTATTCCATCACCTTTGTAGCATCTATATCAATTGAAATTTTGGTGGTTATTTCTATAATGGCTTCTGTCACATGGCAAGTTCTTATTGTGGCTGTTCCTGCAATAGTTGCATCAATATTCATTCAGAAATATTATCAAGCCACTGCAAGGGAACTAATTCGGATCAACGGAACCACCAAAGCTCCAATCATGAACTTTGCCGCTGAGACATCACTTGGAGTGGTGACTGTAAGAGCATACAACATGTCAGACAGATTTTTCAAAAACTACATAAAACTTGTGGACACAGATGCTTCATTGTTCTTTCATTCCAATGTGGCAATGGAATGGGTAGTTTTAAGAATTGAAGCAGTTCAAAACTTGACTGTCATCACTGCAGCTTTGTTGCTTATTCTACTTCCTCAAGGATATGTATCGCCAGGCCTTGTAGGACTGTCTCTTTCCTATGCTTTTACTTTGACGGGAGCACAGATATTTTGGACTAGATGGTTTTCCAACTTATCAAACTACGTTATCTCTGTTGAAAGAATCAAGCAATTCATTCACATACCAGCCGAGCCTCCTGCCACTGTGGAGGATAACCAACCGCCATCTTCATGGCCTTCAAAGGGCAAGATTGAACTTCAAGGCCTGGAGGTTAGGTATCGTCCTAATGCTCCATTAGTCCTCAAGGGAATCACTTGTACATTTAAAGAAGGGAGTAGGGTAGGAGTTGTTGGAAGGACTGGAAGTGGAAAAAGTACACTTATAAGTGCTTTGTTTCGCTTAGTTGAGCCTTCAAGAGGTGATATTCTCATTGATGGGATAAACATTTGTTCAATGGGGTTGAAGGATTTGAGAACGAAGCTAAGCATAATCCCTCAAGAACCAACTCTATTCAAGGGAAGCATTAGGACAAACCTGGACCCTCTAGACATGTACTCAGATGATGAAATATGGAAGGCTGAAGAGAAATGTCAGCTTAAGGAAACAATCCGCGAGTTACCAAGTCTGTTGGACTCATCGGTGAGCGATGAAGGTGGAAACTGGAGCTTGGGACAAAGACAATTGTTTTGTCTTGGAAGAGTTCTACTTAAGAGAAACCGAATTCTTGTTCTGGATGAAGCTACTGCCTCCATTGACTCGGCTACAGATGCCATTCTACAAAGAGTAATTAGACAAGAATTTGCAGAATGCACAGTTATAACAGTTGCTCATAGAGTTCCAACCGTAATAGACAGTGACATGGTCATGGTCCTCTCTTATGGGAAAGTGGTGGAATATGATGAGCCTTCAAAGCTAATGGAGACCAACTCTTCTTTCTCTAAGCTAGTAGCTGAATATTGGTCTAGCTGCAAGAAGAATTCATTCCCAAATATTAGCAGGCAGCAGCAATGA 3873 0.3891 MSYLGEISEPLLPQKVETKQTELRHATFLSKLIFSWINSLLTLGYSKPLDLQDIPSLVSEDEANIAYQKFVHAWESLVRERTKNNAKSLVLWSIGRTFLKENILIAFYALIRTISVAVSPLILYAFVNYSNRTEADLRKGLSIVGILIFTKVFESLSQRHWFFNSRRSGMKMRSALMVAVYQKQLKLSSSARTRHSAGEIVNYIAVDAYRMGEFPWWFHLTWTCALQLVLSIVILFGVVGIGAIPGLVPLLICGLLNVPFARILQNCQSQFMMAQDKRLRSTSEILNSMKIIKLQSWEEKFKKLVDSLRDKEFVWLSKAQKLKAFGSFLYWMSPTMISAVVFLGCAISKSAPLNAETIFTVLATLRNMAEPVRMIPEALSIMIQVKVSFDRLNNFLLEEELNADDSERNFKQCSGNAVEIQDGNFIWDHESVSPTLTHVNLEIKRGQKIAVCGPVGAGKSSLLYAILGEISKISGTVNVGGNLAYVSQSSWIQSGTVQDNILFGKPMDKTRYEKAITACALDKDINDFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMTALGAKTVILVTHQVEFLSEVDTILVMESGKVIQSGCYENLLTAGTAFELLVSAHKDTIAELNQDNENKRDYENEVSSNPQDSLGFHLTKDPNEGDSSSIKGPIGVQLTQEEEKVTGDAGWKPFWDYINYSKGSFMLCLIVLAQSVFIALQTASTFWLAIAIKIPKVTNATLIGVYASISFASSAFIYVRTYLTALLGLKASTVFFSSFTTAIFNAPMLFFDSTPVGRILTRASSDLSIMDFDIPYSITFVASISIEILVVISIMASVTWQVLIVAVPAIVASIFIQKYYQATARELIRINGTTKAPIMNFAAETSLGVVTVRAYNMSDRFFKNYIKLVDTDASLFFHSNVAMEWVVLRIEAVQNLTVITAALLLILLPQGYVSPGLVGLSLSYAFTLTGAQIFWTRWFSNLSNYVISVERIKQFIHIPAEPPATVEDNQPPSSWPSKGKIELQGLEVRYRPNAPLVLKGITCTFKEGSRVGVVGRTGSGKSTLISALFRLVEPSRGDILIDGINICSMGLKDLRTKLSIIPQEPTLFKGSIRTNLDPLDMYSDDEIWKAEEKCQLKETIRELPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRVIRQEFAECTVITVAHRVPTVIDSDMVMVLSYGKVVEYDEPSKLMETNSSFSKLVAEYWSSCKKNSFPNISRQQQ 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi67g00034 1290 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 24 1274 - -
Vivi67g00034 1290 MobiDBLite consensus disorder prediction 651 684 - -
Vivi67g00034 1290 CDD ABCC_MRP_domain2 1036 1256 - -
Vivi67g00034 1290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 414 638 IPR027417 -
Vivi67g00034 1290 SUPERFAMILY ABC transporter transmembrane region 709 1020 IPR036640 GO:0005524|GO:0016020
Vivi67g00034 1290 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 726 988 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi67g00034 1290 FunFam Multidrug resistance protein associated1 397 661 - -
Vivi67g00034 1290 SUPERFAMILY ABC transporter transmembrane region 91 398 IPR036640 GO:0005524|GO:0016020
Vivi67g00034 1290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1027 1271 IPR027417 -
Vivi67g00034 1290 Gene3D - 1021 1272 IPR027417 -
Vivi67g00034 1290 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1040 1272 IPR003439 GO:0005524
Vivi67g00034 1290 CDD ABC_6TM_ABCC_D2 720 1013 IPR044726 GO:0140359
Vivi67g00034 1290 CDD ABC_6TM_ABCC_D1 104 392 IPR044746 GO:0140359
Vivi67g00034 1290 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 103 384 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi67g00034 1290 Pfam ABC transporter 436 570 IPR003439 GO:0005524
Vivi67g00034 1290 CDD ABCC_MRP_domain1 418 618 - -
Vivi67g00034 1290 FunFam ABC transporter C family member 3 1021 1272 - -
Vivi67g00034 1290 FunFam ABC transporter C family member 10 86 400 - -
Vivi67g00034 1290 Pfam ABC transporter 1055 1203 IPR003439 GO:0005524
Vivi67g00034 1290 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 418 641 IPR003439 GO:0005524
Vivi67g00034 1290 ProSitePatterns ABC transporters family signature. 543 557 IPR017871 GO:0005524|GO:0016887
Vivi67g00034 1290 MobiDBLite consensus disorder prediction 664 684 - -
Vivi67g00034 1290 Gene3D ABC transporter type 1, transmembrane domain 78 401 IPR036640 GO:0005524|GO:0016020
Vivi67g00034 1290 Gene3D ABC transporter type 1, transmembrane domain 692 1019 IPR036640 GO:0005524|GO:0016020
Vivi67g00034 1290 Coils Coil 642 662 - -
Vivi67g00034 1290 Gene3D - 425 670 IPR027417 -
Vivi67g00034 1290 SMART AAA_5 1064 1257 IPR003593 GO:0016887
Vivi67g00034 1290 SMART AAA_5 445 618 IPR003593 GO:0016887
Vivi67g00034 1290 FunFam ABC transporter C family member 5 690 1019 - -
Vivi67g00034 1290 Pfam ABC transporter transmembrane region 105 364 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi67g00034 1290 Pfam ABC transporter transmembrane region 732 988 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi67g00034 418 665 Calmodulin-binding Proteins AT2G36910 25.746 1.11e-20 97.4